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Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT2G19440.1 |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 52014.1 Isoelectric Point: 4.7078 |
Chromosome | Chromosome/Scaffold: 2 Start: 8418164 End: 8419806 |
Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 443 | 3.5e-24 |
WCMFNTEAKDLTKLAANIDYACTFSDCTALGYGSSCNTLDANGNASYAFNMYFQVKNQDEDACIFQGLATITTKNISQGQCN | |||
GH17 | 21 | 339 | 0 |
LGVNWGTMATHKLPPKKVVQMLKDNNINKVKLFDADETTMSALSGSGLEVMVAIPNDQLKVMGSYDRAKDWVHKNVTRYNFNGGVNITFVAVGNEPFLKS YNGSFINLTFPALQNIQNALNEAGLGSSVKATVPLNADVYDSPSSNPVPSAGRFRPDIIGQMTQIVDFLGNNSAPITINIYPFLSLYGNDDFPLNYAFFD GAKPVDDNGIAYTNVFDANFDTLVSALKAVGHGDMPIIVGEVGWPTEGDKHANSGSAYRFYNGLLPRLGENRGTPLRPTYIEVYLFGLLDEDAKSIAPGE FERHWGIFKFDGQPKFPID |
Full Sequence |
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Protein Sequence Length: 479 Download |
MNLLAFVVGF GIMGIVMVDG LGVNWGTMAT HKLPPKKVVQ MLKDNNINKV KLFDADETTM 60 SALSGSGLEV MVAIPNDQLK VMGSYDRAKD WVHKNVTRYN FNGGVNITFV AVGNEPFLKS 120 YNGSFINLTF PALQNIQNAL NEAGLGSSVK ATVPLNADVY DSPSSNPVPS AGRFRPDIIG 180 QMTQIVDFLG NNSAPITINI YPFLSLYGND DFPLNYAFFD GAKPVDDNGI AYTNVFDANF 240 DTLVSALKAV GHGDMPIIVG EVGWPTEGDK HANSGSAYRF YNGLLPRLGE NRGTPLRPTY 300 IEVYLFGLLD EDAKSIAPGE FERHWGIFKF DGQPKFPIDL SGQGQNKLLI GAENVTYQPK 360 KWCMFNTEAK DLTKLAANID YACTFSDCTA LGYGSSCNTL DANGNASYAF NMYFQVKNQD 420 EDACIFQGLA TITTKNISQG QCNFPIQIVA STASSFSSSL VLLIAGVWFL LSGVMFEV* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 247 | 331 | 92 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-15 | 361 | 431 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 361 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-74 | 21 | 339 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005886 | plasma membrane |
GO:0005975 | carbohydrate metabolic process |
GO:0031225 | anchored to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38251.1 | 0 | 28 | 476 | 1 | 450 | AC006193_7 Similar to glucan endo-1,3-beta-glucosidase precursor [Arabidopsis thaliana] |
GenBank | AAS99718.1 | 0 | 22 | 476 | 26 | 481 | At1g64760 [Arabidopsis thaliana] |
RefSeq | NP_176656.1 | 0 | 22 | 476 | 26 | 481 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 1 | 455 | 1 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 3 | 448 | 7 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 21 | 341 | 2 | 316 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3f55_C | 0 | 21 | 341 | 2 | 316 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3f55_B | 0 | 21 | 341 | 2 | 316 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3f55_A | 0 | 21 | 341 | 2 | 316 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 3em5_D | 0 | 21 | 341 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |