| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G20680.1 |
| Family | GH5 |
| Protein Properties | Length: 434 Molecular Weight: 49558.3 Isoelectric Point: 6.9549 |
| Chromosome | Chromosome/Scaffold: 2 Start: 8920467 End: 8923173 |
| Description | OsMan02 - Endo-Beta-Mannanase, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 53 | 379 | 9.1e-34 |
| DGKALYVNGWNSYWFMDHAVNDHSRHRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQISPGRFDERVFKALDHVIAEAKTHGVRLLLSLVNNLQAYGGKT QYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNYLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNKHLLTVGLE GFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQGFEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDR FYRTIFDVIYKSAKRKRSGAGTLVWQF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 434 Download |
| MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN 60 GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF NDGGYNALQI SPGRFDERVF 120 KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR 180 YFKNYLTVLL TRKNSLTGIE YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS 240 IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF 300 HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV 360 IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS IQRLMIEQSC RLSRITGRHL 420 LDKKSIEMCS HRP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0003 | 200 | 295 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 7.0e-8 | 203 | 349 | 148 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 3.0e-23 | 82 | 433 | 361 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD20927.1 | 0 | 1 | 433 | 1 | 403 | (1-4)-beta-mannan endohydrolase [Arabidopsis thaliana] |
| GenBank | ABK95966.1 | 0 | 5 | 432 | 6 | 434 | unknown [Populus trichocarpa] |
| RefSeq | NP_179660.2 | 0 | 1 | 433 | 1 | 433 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_194561.1 | 0 | 3 | 432 | 2 | 430 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 5 | 432 | 6 | 434 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 42 | 416 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
