Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT2G21610.1 |
Family | CE8 |
Protein Properties | Length: 353 Molecular Weight: 39058 Isoelectric Point: 8.0348 |
Chromosome | Chromosome/Scaffold: 2 Start: 9245161 End: 9247025 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 52 | 327 | 0 |
RVDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWSDGEDILESPTLTIFASDFVCRFLTIQNKFGTAG RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGSTFLG RPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQLSDEEATVFLSKDFIG |
Full Sequence |
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Protein Sequence Length: 353 Download |
MGLYKTKSKR SIANYHHIII INIFILSSIT SSSMASSSSP SSIDFSTAIL IRVDQSGKGD 60 FSKIQEAIES IPPNLNNSQL YFIWVKPGIY REKVVIPAEK PYITLSGTQA SNTFLIWSDG 120 EDILESPTLT IFASDFVCRF LTIQNKFGTA GRAVALRVAA DKAAFYGCVI TSYQDTLLDD 180 NGNHYFKNCY IEGATDFICG SASSLYERCH LHSLSPNNGS ITAQMRTSAT EKSGFTFLGC 240 KLTGSGSTFL GRPWGAYSRV VFAYSFFSNV VAPQGWNQWG DSTKENTVYY GEYKCYGPGA 300 DREQRVEWSK QLSDEEATVF LSKDFIGGKD WLRPAPSHFK NAPKQTQNKE IN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 1.0e-81 | 51 | 334 | 301 | + probable pectinesterase | ||
PLN02497 | PLN02497 | 5.0e-85 | 51 | 336 | 299 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-87 | 50 | 337 | 300 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 5.0e-103 | 51 | 334 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 50 | 333 | 284 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0006499 | N-terminal protein myristoylation |
GO:0009505 | plant-type cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 33 | 339 | 28 | 332 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 33 | 339 | 46 | 350 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_179755.1 | 0 | 1 | 352 | 1 | 352 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002280496.1 | 0 | 45 | 339 | 1 | 293 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 25 | 340 | 1 | 315 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 51 | 333 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 53 | 333 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-18 | 48 | 336 | 6 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-18 | 48 | 336 | 6 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-18 | 48 | 336 | 6 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |