| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G28470.1 |
| Family | GH35 |
| Protein Properties | Length: 853 Molecular Weight: 93209.9 Isoelectric Point: 7.9261 |
| Chromosome | Chromosome/Scaffold: 2 Start: 12168840 End: 12173570 |
| Description | beta-galactosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 342 | 0 |
| LVIDGKRKVLISGSIHYPRSTPEMWPELIQKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLH FVPGIKFRTDNEPFKEEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKSYIKWSASMALSLDTGVPWNMCQQTDAPDPMINTCNG FYCDQFTPNSNNKPKMWTENWSGWFLGFGDPSPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFDRTSGGPLISTSYDYDAPIDEYGLLRQPKWGHLR DLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 853 Download |
| MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP 60 EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY DLVKFVKLAA KAGLYVHLRI 120 GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI 180 ILSQIENEYG NIDSAYGAAA KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY 240 CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG 300 GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS 360 LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN LPAWSVSILP DCKNVAFNTA 420 KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK 480 SDYLWYSLRT DIKGDETFLD EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI 540 NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL 600 KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ 660 SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ TLYHVPRSWL KPSGNILVLF 720 EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST 780 QVIFSIKFAS FGTPKGTCGS FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG 840 VVKSLAVEAS CS* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-8 | 54 | 206 | 179 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 3.0e-22 | 774 | 851 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-26 | 34 | 334 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-171 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 34 | 852 | 826 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005618 | cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD21482.1 | 0 | 7 | 852 | 1 | 839 | putative beta-galactosidase [Arabidopsis thaliana] |
| DDBJ | BAD20774.2 | 0 | 1 | 852 | 1 | 851 | beta-galactosidase [Raphanus sativus] |
| EMBL | CAB64744.1 | 0 | 1 | 852 | 1 | 852 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_850121.1 | 0 | 1 | 852 | 1 | 852 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002530296.1 | 0 | 12 | 852 | 3 | 842 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 39 | 340 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0005 | 518 | 724 | 411 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 5e-38 | 39 | 327 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.001 | 625 | 741 | 505 | 595 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 5e-38 | 39 | 327 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
