| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G30933.1 |
| Family | CBM43 |
| Protein Properties | Length: 228 Molecular Weight: 24066 Isoelectric Point: 4.4915 |
| Chromosome | Chromosome/Scaffold: 2 Start: 13164059 End: 13166726 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 82 | 164 | 5.8e-34 |
| WCVARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPSSCNFDGTAITISADPSLGSCH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 228 Download |
| MDKGFRLVTS LLLLSFFFSG TKAITEPIEE EKDITTPLAT NPTTTPTTVV PNSDSDASAV 60 ATTPLTIPSS PHGVAYPGDQ SWCVARENVA KMALQAALDY ACGIGGADCS EIQEGGNCYN 120 PNSLRAHASF AFNSYYQKNP IPSSCNFDGT AITISADPSL GSCHFPSTST SESILNVTSE 180 DGLGLFGRIP SHPTPKPEAS TSSSRTLISF LYFLCFCVLY PLVITLT* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-21 | 81 | 152 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-37 | 81 | 165 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 4.99997e-41 | 31 | 179 | 53 | 206 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| RefSeq | NP_001031450.1 | 0 | 1 | 227 | 1 | 227 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_001118420.1 | 0 | 1 | 159 | 1 | 159 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002283721.1 | 9.80909e-45 | 82 | 219 | 99 | 233 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512573.1 | 3.99931e-42 | 23 | 165 | 159 | 308 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 8e-17 | 81 | 169 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
