| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G32290.1 |
| Family | GH14 |
| Protein Properties | Length: 578 Molecular Weight: 66567.5 Isoelectric Point: 6.7462 |
| Chromosome | Chromosome/Scaffold: 2 Start: 13714547 End: 13716929 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 81 | 499 | 0 |
| YVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVESKGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEI GDSNPDIFYTNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGPAGELRYPSYSETQGWVFPGIGEFQCYDKYLR SDYEEEVRRIGHPEWKLPENAGEYNSVPGETEFFEYSNGTYLKEEGNFFLSWYSKKLLLHGDQILDEANKVFLGCKLKIAAKVSGIHWWYKTESHAAELT AGYYNLKNRDGYRAIAKIMRRHHAILNFTCLEMKNTEQPAKAKSGPQELVQQVLSSGWREGIEVAGENALPRFDRNGYNQIILNARPNGVNQDGKPRMFG FTYLRLSDKLLNEPNFSTF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 578 Download |
| MTSVLGMMNP NLINGRNLHK GSSIFVQDKE TKKRVQWRLS IKEGSLRTHQ ATASSATEPK 60 ATEFNTTTYE DKMLTNYVPV YVMLQLGVIT NDNVLENEES LKKQLKKLKQ SQVDGVMVDV 120 WWGIVESKGP KQYQWSAYRN LFAIVQSFGL KLQAIMSFHR CGGNIGDDVN IPIPKWVLEI 180 GDSNPDIFYT NKSGNRNKEC LSLSVDNLSL FRGRTAVEMY RDYMKSFREN MEDFISSGVI 240 IDIEVGLGPA GELRYPSYSE TQGWVFPGIG EFQCYDKYLR SDYEEEVRRI GHPEWKLPEN 300 AGEYNSVPGE TEFFEYSNGT YLKEEGNFFL SWYSKKLLLH GDQILDEANK VFLGCKLKIA 360 AKVSGIHWWY KTESHAAELT AGYYNLKNRD GYRAIAKIMR RHHAILNFTC LEMKNTEQPA 420 KAKSGPQELV QQVLSSGWRE GIEVAGENAL PRFDRNGYNQ IILNARPNGV NQDGKPRMFG 480 FTYLRLSDKL LNEPNFSTFK MFLKRMHANQ EYCSEPERYN HELLPLERSR NDESLEMFME 540 ETEPFDPFPW LDETDMSIRP FESVLSLLRS TFLRKKS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 1.0e-141 | 75 | 507 | 436 | + beta-amylase | ||
| PLN00197 | PLN00197 | 7.0e-153 | 78 | 526 | 460 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 2.0e-163 | 59 | 507 | 453 | + beta-amylase | ||
| PLN02803 | PLN02803 | 4.0e-172 | 2 | 506 | 509 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 63 | 573 | 518 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009507 | chloroplast |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1UKO | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| GenBank | AAC69949.1 | 0 | 73 | 577 | 1 | 505 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAY40266.1 | 0 | 67 | 558 | 2 | 494 | beta-amylase [Glycine max] |
| DDBJ | BAA09462.1 | 0 | 67 | 558 | 2 | 494 | beta-amylase [Glycine max] |
| RefSeq | NP_180788.2 | 0 | 1 | 577 | 1 | 577 | BAM6 (BETA-AMYLASE 6); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uko_D | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_A | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_D | 0 | 67 | 558 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 448 | 113 | 558 | 0 |
| HO803971 | 398 | 156 | 551 | 0 |
| HO782669 | 389 | 173 | 559 | 0 |
| GT625519 | 285 | 155 | 439 | 0 |
| EL456360 | 287 | 150 | 436 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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