y
Basic Information | |
---|---|
Species | Arabidopsis thaliana |
Cazyme ID | AT2G36710.1 |
Family | CE8 |
Protein Properties | Length: 408 Molecular Weight: 44973.1 Isoelectric Point: 6.6129 |
Chromosome | Chromosome/Scaffold: 2 Start: 15389466 End: 15391251 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 92 | 381 | 0 |
TVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPE PDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFV NCKIDGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDG |
Full Sequence |
---|
Protein Sequence Length: 408 Download |
MPIKPVLTTL IALLSIILAL YTIQLPSSRS LSSIATTIGA LAKYSTFFGH KHHHHHHHHH 60 HHHHYHHHEP IKCCEKWTSR LRHQYKTSLV LTVDLHGCGN FSNVQSAIDV VPDLSSSKTL 120 IIVNSGSYRE KVTVNENKTN LVIQGRGYQN TSIEWNDTAK SAGNTADSFS FVVFAANFTA 180 YNISFKNNAP EPDPGEADAQ AVALRIEGDQ AAFYGCGFYG AQDTLLDDKG RHFFKECFIQ 240 GSIDFIFGNG RSLYQDCTIN SIAKGNTSGV TGSITAQGRQ SEDEQSGFSF VNCKIDGSGE 300 ILLGRAWGAY ATVVFSNTYM SGIITPEGWN NWGDSTKEKT VTFGEHKCYG PGADYKERVL 360 FGKQLTDSEA SSFIDVSFID GDEWLRHTNI VSEHTSKDIG DDLIGFY* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 6.0e-101 | 87 | 386 | 300 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-103 | 89 | 385 | 304 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-105 | 90 | 385 | 297 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-130 | 76 | 387 | 327 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-136 | 87 | 386 | 303 | + probable pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO22722.1 | 0 | 1 | 407 | 1 | 407 | putative pectinesterase family protein [Arabidopsis thaliana] |
EMBL | CBI30191.1 | 0 | 68 | 385 | 80 | 399 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181209.1 | 0 | 1 | 407 | 1 | 407 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 90 | 385 | 14 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 76 | 398 | 3 | 326 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 91 | 388 | 9 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.00386e-43 | 97 | 390 | 11 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-20 | 101 | 373 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-20 | 101 | 373 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-20 | 101 | 373 | 18 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |