| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G45880.1 |
| Family | GH14 |
| Protein Properties | Length: 692 Molecular Weight: 77131 Isoelectric Point: 6.6347 |
| Chromosome | Chromosome/Scaffold: 2 Start: 18878518 End: 18882578 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 251 | 668 | 0 |
| YVMLPLGVINMKCELADRDGLLKHLRILKSIHVDGVKVDCWWGIVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEI GRTNPDIYFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRIELAEFLEDGVISMVEIGLGPCGELRYPSCPIKHGWRYPGVGEFQCYDKYLS KSLRKAAESRGHLFWARGPDNTGSYNSQPQGTGFFCDGGDYDGLYGRFFLKWYSQVLIDHADQILCLAKLVFDSSCIAAKLPDVHWWYRTASHAAELTAG FYNPSNRDGYSAIASTLKKHGATLSFVSGEVQVLNRPDDFSGALGEPEAVAWQVLNAAWDSGTPVARENSLACHDRVGYNKMLESVKFRNDPDRKHLSSF AYSRLVPALMEGHNIVEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 692 Download |
| MATDMHKLLG TSEEDDDEEM DMDVKEEDDG DRRNRDKHAA SGSSSNDEFM FQQSMQDQVG 60 TPGGGGSRRS RPLEEKERTK LRERHRRAIT ARILGGLRRH GNYNLRVRAD INDVIAALAR 120 EAGWVVLPDG TTFPSKSQGT KPTGGSSAVA AGSSASHIAS QQTSPPALRV VSSGLRSPVE 180 LSSCRMKGVF TPAPSPYDML PIQSPELVGS VNKAEGLVGC SVDVINSKQI LEIPPNLTEQ 240 DFSGTPYVPV YVMLPLGVIN MKCELADRDG LLKHLRILKS IHVDGVKVDC WWGIVEGHSP 300 QEYNWTGYRQ LFQMVRDLNL KIQVLMSFHE CGGNVGDDVC IPLPHWVAEI GRTNPDIYFT 360 DREGRRNPEC LSWGIDKERI LRGRTALEVY FDYMRSFRIE LAEFLEDGVI SMVEIGLGPC 420 GELRYPSCPI KHGWRYPGVG EFQCYDKYLS KSLRKAAESR GHLFWARGPD NTGSYNSQPQ 480 GTGFFCDGGD YDGLYGRFFL KWYSQVLIDH ADQILCLAKL VFDSSCIAAK LPDVHWWYRT 540 ASHAAELTAG FYNPSNRDGY SAIASTLKKH GATLSFVSGE VQVLNRPDDF SGALGEPEAV 600 AWQVLNAAWD SGTPVARENS LACHDRVGYN KMLESVKFRN DPDRKHLSSF AYSRLVPALM 660 EGHNIVEFER FVKKLHGEAV MNHHHHHHQQ V* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 3.0e-128 | 248 | 675 | 435 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 4.0e-141 | 248 | 675 | 432 | + beta-amylase | ||
| PLN02801 | PLN02801 | 7.0e-172 | 247 | 678 | 439 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 682 | 699 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 88 | 678 | 600 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC28536.1 | 0 | 1 | 680 | 1 | 680 | putative beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAE99337.1 | 0 | 1 | 691 | 1 | 691 | putative beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_182112.2 | 0 | 1 | 691 | 1 | 691 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 1 | 682 | 1 | 696 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 682 | 4 | 701 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdq_A | 0 | 247 | 678 | 11 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 247 | 678 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1byd_A | 0 | 247 | 678 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1byc_A | 0 | 247 | 678 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1byb_A | 0 | 247 | 678 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX119447 | 257 | 408 | 664 | 0 |
| JG638376 | 267 | 256 | 522 | 0 |
| DT587209 | 255 | 264 | 518 | 0 |
| FG558188 | 231 | 391 | 621 | 0 |
| DV021150 | 292 | 333 | 624 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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