y
Basic Information | |
---|---|
Species | Arabidopsis thaliana |
Cazyme ID | AT2G47030.1 |
Family | CE8 |
Protein Properties | Length: 589 Molecular Weight: 64137.5 Isoelectric Point: 9.4348 |
Chromosome | Chromosome/Scaffold: 2 Start: 19324233 End: 19326397 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 277 | 571 | 0 |
FVVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNT AGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCR IVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWAKVARSAAEVNGFTAANWL |
Full Sequence |
---|
Protein Sequence Length: 589 Download |
MIGKVVVSVA SILLIVGVAI GVVAFINKNG DANLSPQMKA VQGICQSTSD KASCVKTLEP 60 VKSEDPNKLI KAFMLATKDE LTKSSNFTGQ TEVNMGSSIS PNNKAVLDYC KRVFMYALED 120 LATIIEEMGE DLSQIGSKID QLKQWLIGVY NYQTDCLDDI EEDDLRKAIG EGIANSKILT 180 TNAIDIFHTV VSAMAKINNK VDDLKNMTGG IPTPGAPPVV DESPVADPDG PARRLLEDID 240 ETGIPTWVSG ADRKLMAKAG RGRRGGRGGG ARVRTNFVVA KDGSGQFKTV QQAVDACPEN 300 NRGRCIIYIK AGLYREQVII PKKKNNIFMF GDGARKTVIS YNRSVALSRG TTTSLSATVQ 360 VESEGFMAKW MGFKNTAGPM GHQAAAIRVN GDRAVIFNCR FDGYQDTLYV NNGRQFYRNC 420 VVSGTVDFIF GKSATVIQNT LIVVRKGSKG QYNTVTADGN ELGLGMKIGI VLQNCRIVPD 480 RKLTPERLTV ATYLGRPWKK FSTTVIMSTE MGDLIRPEGW KIWDGESFHK SCRYVEYNNR 540 GPGAFANRRV NWAKVARSAA EVNGFTAANW LGPINWIQEA NVPVTIGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 2.0e-109 | 39 | 585 | 557 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 1.0e-111 | 28 | 588 | 565 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 3.0e-138 | 39 | 588 | 567 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-141 | 276 | 572 | 299 | + Pectinesterase. | ||
PLN02197 | PLN02197 | 0 | 27 | 588 | 562 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC27719.1 | 0 | 28 | 588 | 28 | 586 | flower-specific pectin methylesterase precursor [Arabidopsis thaliana] |
GenBank | AAV91509.1 | 0 | 28 | 588 | 28 | 588 | VGD1-like protein 1 [Arabidopsis thaliana] |
EMBL | CAB58974.1 | 0 | 28 | 588 | 28 | 595 | pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_182226.1 | 0 | 28 | 588 | 28 | 588 | VGDH1; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_182227.1 | 0 | 28 | 588 | 28 | 595 | VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 276 | 588 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 276 | 588 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 5e-21 | 276 | 544 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-21 | 276 | 544 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-21 | 276 | 544 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |