| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G47040.1 |
| Family | CE8 |
| Protein Properties | Length: 596 Molecular Weight: 64728.1 Isoelectric Point: 9.3206 |
| Chromosome | Chromosome/Scaffold: 2 Start: 19327896 End: 19330197 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 284 | 578 | 0 |
| FVVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNT AGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCR IVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNWVKIARSAAEVNDFTVANWL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MIGKVVVSVA SILLIVGVAI GVVAYINKNG DANLSPQMKA VRGICEATSD KASCVKTLEP 60 VKSDDPNKLI KAFMLATRDA ITQSSNFTGK TEGNLGSGIS PNNKAVLDYC KKVFMYALED 120 LSTIVEEMGE DLNQIGSKID QLKQWLTGVY NYQTDCLDDI EEDDLRKTIG EGIASSKILT 180 SNAIDIFHTV VSAMAKLNLK VEDFKNMTGG IFAPSDKGAA PVNKGTPPVA DDSPVADPDG 240 PARRLLEDID ETGIPTWVSG ADRKLMTKAG RGSNDGGARI RATFVVAKDG SGQFKTVQQA 300 VNACPEKNPG RCIIHIKAGI YREQVIIPKK KNNIFMFGDG ARKTVISYNR SVKLSPGTTT 360 SLSGTVQVES EGFMAKWIGF KNTAGPMGHQ AVAIRVNGDR AVIFNCRFDG YQDTLYVNNG 420 RQFYRNIVVS GTVDFIFGKS ATVIQNSLIV VRKGNKGQFN TVTADGNEKG LAMKIGIVLQ 480 NCRIVPDKKL AAERLIVESY LGRPWKKFST TVIINSEIGD VIRPEGWKIW DGESFHKSCR 540 YVEYNNRGPG AITNRRVNWV KIARSAAEVN DFTVANWLGP INWIQEANVP VTLGL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02990 | PLN02990 | 1.0e-104 | 39 | 592 | 571 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 8.0e-106 | 28 | 595 | 572 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-134 | 285 | 579 | 297 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 1.0e-135 | 39 | 595 | 572 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02197 | PLN02197 | 0 | 27 | 595 | 572 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0009860 | pollen tube growth |
| GO:0012505 | endomembrane system |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV91508.1 | 0 | 28 | 595 | 28 | 595 | VANGUARD 1 [Arabidopsis thaliana] |
| GenBank | AAV91509.1 | 0 | 28 | 595 | 28 | 588 | VGD1-like protein 1 [Arabidopsis thaliana] |
| EMBL | CAB58974.1 | 0 | 28 | 595 | 28 | 595 | pectin methylesterase [Arabidopsis thaliana] |
| RefSeq | NP_182226.1 | 0 | 28 | 595 | 28 | 588 | VGDH1; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_182227.1 | 0 | 28 | 595 | 28 | 595 | VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 285 | 595 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 280 | 595 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 8e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 8e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 8e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
