| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT2G47280.1 |
| Family | CE8 |
| Protein Properties | Length: 337 Molecular Weight: 37016.9 Isoelectric Point: 6.14 |
| Chromosome | Chromosome/Scaffold: 2 Start: 19416775 End: 19418383 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 35 | 322 | 0 |
| ITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGITFKNTYNIVPN NKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSD CTVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLSLSEVDGFASVSFID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MKRVASYNYK IVCMVVMTLF VYGYSAAAEQ IAYTITVDLN GGGNFTTVQS AIDSISPPNH 60 NWIRVFTQNG IYREKVTIPK EKGFIYLQGK GIEQTVIEYD DHQATDISAT FTAFADDIVI 120 SGITFKNTYN IVPNNKREIV PAVAARMLGD RYVVTDSSFV GLQDTLFDGK GRHYYKRCII 180 SGGIDFIFGY GQSLFKECTL NMTLGIYAPD NPYGTITAHQ RPSPSDEGGF VFSDCTVTGV 240 GKTLLGRAWG SNARVIFDRS RLSDVVLPIG WDAWRAKGNE RDLTFVEAGC TGAGADTSQR 300 VPWLKKLSLS EVDGFASVSF IDQDGWISRF PIEGGP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 1.0e-73 | 32 | 327 | 309 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 1.0e-74 | 32 | 327 | 296 | + putative pectinesterase | ||
| PLN02480 | PLN02480 | 4.0e-79 | 34 | 327 | 298 | + Probable pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-109 | 11 | 332 | 326 | + probable pectinesterase | ||
| PLN02176 | PLN02176 | 0 | 1 | 334 | 341 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB63828.1 | 0 | 146 | 336 | 57 | 247 | putative pectinesterase [Arabidopsis thaliana] |
| GenBank | AAY78730.1 | 0 | 17 | 336 | 1 | 320 | pectinesterase family protein [Arabidopsis thaliana] |
| GenBank | ACC68156.1 | 0 | 7 | 333 | 11 | 343 | putative pectinesterase family protein [Arabidopsis halleri subsp. halleri] |
| RefSeq | NP_179505.1 | 0 | 7 | 333 | 11 | 338 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_850471.2 | 0 | 1 | 336 | 1 | 336 | pectinesterase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-28 | 35 | 335 | 9 | 318 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-22 | 37 | 303 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.00000000000003 | 42 | 299 | 15 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.00000000000003 | 42 | 299 | 15 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.00000000000003 | 42 | 299 | 15 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
