| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G01180.1 |
| Family | GT5 |
| Protein Properties | Length: 793 Molecular Weight: 87593 Isoelectric Point: 6.933 |
| Chromosome | Chromosome/Scaffold: 3 Start: 62245 End: 65845 |
| Description | starch synthase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 302 | 785 | 0 |
| NVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYGGNRL DILKRMVLFCKAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAHQGRGPVDDFSYVDLPSHYLDSFKLYDPV GGEHFNIFAAGLKAADRVLTVSHGYSWEVKTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAALQKELGLP VRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLEEVLRQMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAM NYGTIPVVHAVGGLRDTVQQFDPYSETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQRRGMTQDLSWDNAAEKYEEVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 793 Download |
| MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV 60 EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK LVSSIKESTP DLDDAKASSK 120 QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS 180 ASVISSSPVT SPQKPSDVAT NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS 240 KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV 300 MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK 360 VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR LDILKRMVLF CKAAVEVPWY 420 VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD 480 DFSYVDLPSH YLDSFKLYDP VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH 540 NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL 600 PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR 660 DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA MNYGTIPVVH AVGGLRDTVQ 720 QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK 780 YEEVLVAAKY HW* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-85 | 301 | 789 | 513 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-136 | 301 | 783 | 494 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-172 | 301 | 784 | 494 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 301 | 788 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 302 | 785 | 495 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005978 | glycogen biosynthetic process |
| GO:0009058 | biosynthetic process |
| GO:0009250 | glucan biosynthetic process |
| GO:0009507 | chloroplast |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV25894.1 | 0 | 8 | 792 | 6 | 751 | starch synthase isoform II [Manihot esculenta] |
| GenBank | ACL98480.1 | 0 | 1 | 792 | 1 | 774 | starch synthase IIa-2 precursor [Glycine max] |
| RefSeq | NP_186767.1 | 0 | 1 | 792 | 1 | 792 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002278470.1 | 0 | 41 | 792 | 58 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
| RefSeq | XP_002531856.1 | 0 | 1 | 792 | 1 | 754 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 301 | 787 | 10 | 510 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3vue_A | 0 | 301 | 787 | 10 | 510 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 301 | 784 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 301 | 784 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 301 | 784 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777841 | 319 | 475 | 793 | 0 |
| HO777841 | 444 | 44 | 483 | 0 |
| HO781048 | 393 | 401 | 793 | 0 |
| HO445868 | 438 | 356 | 793 | 0 |
| HO781048 | 38 | 363 | 400 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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