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Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G04010.1 |
Family | CBM43 |
Protein Properties | Length: 492 Molecular Weight: 54060 Isoelectric Point: 5.0536 |
Chromosome | Chromosome/Scaffold: 3 Start: 1036841 End: 1039482 |
Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 374 | 456 | 6.1e-26 |
WCMFNPNGRGNMSRLGDNINYACSHSDCTALGYGSSCGNLDANGNASYAFNMYFQVQNQEAQACDFEGLATITTQNISQGQCN | |||
GH17 | 33 | 352 | 0 |
LGVNWGTMASHQLPPKTVVEMLKDNNIQKVKLFDADTNTMGALAGSGVEVMVAIPNDLLLAMGNYQRAKDWVQRNVSRFNFNNGVKIKYVAVGNEPFLTA YNGSFINLTYPALFNIQTALNEAGVGDFTKATVPLNADVYNSPPDNQVPSAGRFRSDIIQEMTQIVNFLAQNKAPFTVNIYPFLSLYLSSDFPFEYAFFD GQNTVNDNGVIYTNVFDASFDTLLASLNALNHGNMEVIVGEVGWPTDGDKNANVPNAERFYSGLLPRLANNVGTPMRKGYIEVYLFGFIDEDAKSVAPGN FERHWGIFKFDGQPKFPVDF |
Full Sequence |
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Protein Sequence Length: 492 Download |
MNYRRKQSAI TNSAVVFIII SAVCFLSGGV SGLGVNWGTM ASHQLPPKTV VEMLKDNNIQ 60 KVKLFDADTN TMGALAGSGV EVMVAIPNDL LLAMGNYQRA KDWVQRNVSR FNFNNGVKIK 120 YVAVGNEPFL TAYNGSFINL TYPALFNIQT ALNEAGVGDF TKATVPLNAD VYNSPPDNQV 180 PSAGRFRSDI IQEMTQIVNF LAQNKAPFTV NIYPFLSLYL SSDFPFEYAF FDGQNTVNDN 240 GVIYTNVFDA SFDTLLASLN ALNHGNMEVI VGEVGWPTDG DKNANVPNAE RFYSGLLPRL 300 ANNVGTPMRK GYIEVYLFGF IDEDAKSVAP GNFERHWGIF KFDGQPKFPV DFRGQGQKKF 360 LTGAQNVQYF LNQWCMFNPN GRGNMSRLGD NINYACSHSD CTALGYGSSC GNLDANGNAS 420 YAFNMYFQVQ NQEAQACDFE GLATITTQNI SQGQCNFPIQ IGEPSSGHYD YSYGSMVRLC 480 LVMSGLVFLL I* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-7 | 228 | 343 | 120 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-18 | 373 | 444 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-31 | 373 | 457 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-72 | 33 | 352 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0031225 | anchored to membrane |
GO:0043169 | cation binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_176656.1 | 0 | 34 | 488 | 26 | 481 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 30 | 461 | 18 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_187051.3 | 0 | 1 | 491 | 1 | 491 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_197323.1 | 0 | 1 | 486 | 1 | 488 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 25 | 461 | 17 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur8_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3ur7_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |