| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G05620.1 |
| Family | CE8 |
| Protein Properties | Length: 544 Molecular Weight: 60806.4 Isoelectric Point: 8.9889 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1629658 End: 1631766 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 241 | 526 | 0 |
| TVVAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAG PQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLA TQPTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALSFTVGSFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MGITTALLLV MLMSVHTSSY ETTILKPYKE DNFRSLVAKA CQFIDAHELC VSNIWTHVKE 60 SGHGLNPHSV LRAAVKEAHD KAKLAMERIP TVMMLSIRSR EQVAIEDCKE LVGFSVTELA 120 WSMLEMNKLH GGGGIDLDDG SHDAAAAGGN LKTWLSAAMS NQDTCLEGFE GTERKYEELI 180 KGSLRQVTQL VSNVLDMYTQ LNALPFKASR NESVIASPEW LTETDESLMM RHDPSVMHPN 240 TVVAIDGKGK YRTINEAINE APNHSTKRYV IYVKKGVYKE NIDLKKKKTN IMLVGDGIGQ 300 TIITGDRNFM QGLTTFRTAT VAVSGRGFIA KDITFRNTAG PQNRQAVALR VDSDQSAFYR 360 CSVEGYQDTL YAHSLRQFYR DCEIYGTIDF IFGNGAAVLQ NCKIYTRVPL PLQKVTITAQ 420 GRKSPNQNTG FVIQNSYVLA TQPTYLGRPW KLYSRTVYMN TYMSQLVQPR GWLEWFGNFA 480 LDTLWYGEYN NIGPGWRSSG RVKWPGYHIM DKRTALSFTV GSFIDGRRWL PATGVTFTAG 540 LAN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 5.0e-152 | 35 | 541 | 522 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 8.0e-155 | 91 | 542 | 473 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 1.0e-174 | 99 | 542 | 462 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 0 | 1 | 543 | 548 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 240 | 526 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_187213.1 | 0 | 1 | 543 | 1 | 543 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002279144.1 | 0 | 29 | 543 | 63 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318977.1 | 0 | 7 | 543 | 6 | 539 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330224.1 | 0 | 39 | 543 | 2 | 502 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512462.1 | 0 | 34 | 543 | 32 | 535 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 233 | 541 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 240 | 541 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 9e-24 | 246 | 495 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 9e-24 | 246 | 495 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 9e-24 | 246 | 495 | 14 | 310 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
