| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G07320.1 |
| Family | CBM43 |
| Protein Properties | Length: 461 Molecular Weight: 50603.9 Isoelectric Point: 8.8286 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2332022 End: 2334074 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 371 | 454 | 3.4e-28 |
| WCVVAKGANWTQLGDALSYACSQGNNTCDPIQRGGPCQKPDLTVLHASYAFSSYWAQFRKIGGTCSFNGLATQTIKDPSYGRCE | |||
| GH17 | 26 | 346 | 0 |
| GINYGQLGNNLPSPSDSVNLIKSLNAKRVKLYDANPKILAALNGTDITVSVMVPNELLVNISKSASLSDDWIRSNILPFYPTTKIRYLLVGNEILSLPDS ELKSSLVPAMRKIQRSLKSLGVKKVKVGTTLATDVLQSSFPPSSGEFREDISGLIMKPMLQFLNRTKSFLFVDVYPYFAWAQDPTHVDLDYAIFESTNVT VTDPVSNLTYHNLFDQMIDAFVFAMKRVGYPDIRIWVAETGWPNNGDYDQIGANIYNAATYNRNVVKKLAADPPVGTPARPGKVLPAFVFALYNENQKTG PGTERHFGLLHPNGTQVYGID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 461 Download |
| MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN 60 PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN ILPFYPTTKI RYLLVGNEIL 120 SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI 180 MKPMLQFLNR TKSFLFVDVY PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD 240 QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV 300 GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP 360 ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP IQRGGPCQKP DLTVLHASYA 420 FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-19 | 371 | 442 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-36 | 371 | 455 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-106 | 26 | 346 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009505 | plant-type cell wall |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF20214.1 | 0 | 14 | 460 | 14 | 440 | AC012395_1 putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
| GenBank | AAM65039.1 | 0 | 1 | 460 | 1 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 7 | 460 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 1 | 460 | 1 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002334812.1 | 0 | 7 | 460 | 9 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 347 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 26 | 347 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 347 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 26 | 347 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 26 | 347 | 2 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
