Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G12500.1 |
Family | GH19 |
Protein Properties | Length: 336 Molecular Weight: 36183.7 Isoelectric Point: 7.6513 |
Chromosome | Chromosome/Scaffold: 3 Start: 3962382 End: 3963984 |
Description | CHIT8 - Chitinase family protein precursor, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 88 | 320 | 0 |
GIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATW PCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLE CGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC |
Full Sequence |
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Protein Sequence Length: 336 Download |
MPPQKENHRT LNKMKTNLFL FLIFSLLLSL SSAEQCGRQA GGALCPNGLC CSEFGWCGNT 60 EPYCKQPGCQ SQCTPGGTPP GPTGDLSGII SSSQFDDMLK HRNDAACPAR GFYTYNAFIT 120 AAKSFPGFGT TGDTATRKKE VAAFFGQTSH ETTGGWATAP DGPYSWGYCF KQEQNPASDY 180 CEPSATWPCA SGKRYYGRGP MQLSWNYNYG LCGRAIGVDL LNNPDLVAND AVIAFKAAIW 240 FWMTAQPPKP SCHAVIAGQW QPSDADRAAG RLPGYGVITN IINGGLECGR GQDGRVADRI 300 GFYQRYCNIF GVNPGGNLDC YNQRSFVNGL LEAAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00187 | Chitin_bind_1 | 3.0e-14 | 35 | 73 | 39 | + Chitin recognition protein. | ||
cd06921 | ChtBD1_GH19_hevein | 2.0e-15 | 34 | 73 | 40 | + Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains. This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. | ||
cd00442 | lysozyme_like | 2.0e-19 | 142 | 282 | 141 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
cd00325 | chitinase_glyco_hydro_19 | 2.0e-146 | 90 | 320 | 231 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
pfam00182 | Glyco_hydro_19 | 8.0e-155 | 89 | 320 | 232 | + Chitinase class I. |
Gene Ontology | |
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GO Term | Description |
GO:0004568 | chitinase activity |
GO:0005773 | vacuole |
GO:0005886 | plasma membrane |
GO:0006032 | chitin catabolic process |
GO:0008061 | chitin binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA82810.1 | 0 | 1 | 335 | 1 | 335 | basic endochitinase [Arabidopsis thaliana] |
DDBJ | BAA82814.1 | 0 | 1 | 335 | 1 | 335 | basic endochitinase [Arabidopsis thaliana] |
DDBJ | BAA82818.1 | 0 | 1 | 335 | 1 | 335 | basic endochitinase [Arabidopsis thaliana] |
DDBJ | BAA82824.1 | 0 | 1 | 335 | 1 | 335 | basic endochitinase [Arabidopsis thaliana] |
Swiss-Prot | P19171 | 0 | 1 | 335 | 1 | 335 | CHIB_ARATH RecName: Full=Basic endochitinase B; AltName: Full=Pathogenesis-related protein 3; Short=PR-3; Short=AtChiB; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3iwr_B | 0 | 34 | 329 | 2 | 301 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 3iwr_A | 0 | 34 | 329 | 2 | 301 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 2dkv_A | 0 | 34 | 329 | 2 | 301 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 4dyg_B | 0 | 86 | 327 | 3 | 244 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
PDB | 4dyg_A | 0 | 86 | 327 | 3 | 244 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |