| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G17060.1 |
| Family | CE8 |
| Protein Properties | Length: 345 Molecular Weight: 38812.1 Isoelectric Point: 9.1203 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5816672 End: 5818498 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 46 | 332 | 0 |
| IIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVASATFKVEANHFVAFGISIRNDAPVGM AFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGK VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWAKDLTKQEVESFLSIDFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 345 Download |
| MGHRTRMILV LTLVVMSIWG SDASAMQKTK FDAPLLTEKI ATNRSIIVDI EGKGDYTSVQ 60 KAIDAVPVGN SNWIIVHVRK GIYKERVHIP ENKPFIFMRG NGKGKTVIES SQSSVDNVAS 120 ATFKVEANHF VAFGISIRND APVGMAFTSE NQSVAAFVAA DKVAFYHCAF YSLHNTLFDN 180 KGRHYYHECY IQGSIDFIFG RATSIFNNCE IFVISDKRVK PYGSITAHHR ESAEEKTGYV 240 FIRGKVYGID EVYLGRAKGP YSRVIFAKTY LSKTVVPDGW TNWSYHGSTQ NLYHGEYKCH 300 GPGAERQKRS DWAKDLTKQE VESFLSIDFI DGTSWLPVWL QEKF* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 5.0e-79 | 34 | 336 | 306 | + pectinesterase family protein | ||
| PLN02497 | PLN02497 | 2.0e-80 | 44 | 336 | 297 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 5.0e-84 | 46 | 336 | 291 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 6.0e-89 | 39 | 337 | 309 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 0 | 1 | 340 | 340 | + Probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23222.1 | 0 | 9 | 340 | 15 | 346 | unknown [Glycine max] |
| RefSeq | NP_188331.1 | 0 | 1 | 344 | 1 | 344 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272939.1 | 0 | 8 | 340 | 11 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311381.1 | 0 | 8 | 339 | 14 | 341 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523016.1 | 0 | 17 | 340 | 28 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3.00004e-41 | 45 | 336 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 4e-37 | 47 | 336 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 9e-17 | 56 | 211 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 9e-17 | 56 | 211 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 9e-17 | 56 | 211 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
