| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G19620.1 |
| Family | GH3 |
| Protein Properties | Length: 782 Molecular Weight: 85500.2 Isoelectric Point: 8.6667 |
| Chromosome | Chromosome/Scaffold: 3 Start: 6815613 End: 6818308 |
| Description | beta-D-xylosidase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 74 | 324 | 0 |
| GVPRLGVPPYEWWSEALHGVSDVGPGVHFNGTVPGATSFPATILTAASFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGE DPLVVSKYAVNYVKGLQDVHDAGKSRRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNL LRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTKTREDAVALALKAGLNMNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 782 Download |
| MSIRRFVRLS LLIIALVSSL CESQKNFACD ISAPATAKYG FCNVSLSYEA RAKDLVSRLS 60 LKEKVQQLVN KATGVPRLGV PPYEWWSEAL HGVSDVGPGV HFNGTVPGAT SFPATILTAA 120 SFNTSLWLKM GEVVSTEARA MHNVGLAGLT YWSPNVNVFR DPRWGRGQET PGEDPLVVSK 180 YAVNYVKGLQ DVHDAGKSRR LKVSSCCKHY TAYDLDNWKG IDRFHFDAKV TKQDLEDTYQ 240 TPFKSCVEEG DVSSVMCSYN RVNGIPTCAD PNLLRGVIRG QWRLDGYIVS DCDSIQVYFN 300 DIHYTKTRED AVALALKAGL NMNCGDFLGK YTENAVKLKK LNGSDVDEAL IYNYIVLMRL 360 GFFDGDPKSL PFGNLGPSDV CSKDHQMLAL EAAKQGIVLL ENRGDLPLPK TTVKKLAVIG 420 PNANATKVMI SNYAGVPCKY TSPIQGLQKY VPEKIVYEPG CKDVKCGDQT LISAAVKAVS 480 EADVTVLVVG LDQTVEAEGL DRVNLTLPGY QEKLVRDVAN AAKKTVVLVI MSAGPIDISF 540 AKNLSTIRAV LWVGYPGEAG GDAIAQVIFG DYNPSGRLPE TWYPQEFADK VAMTDMNMRP 600 NSTSGFPGRS YRFYTGKPIY KFGYGLSYSS FSTFVLSAPS IIHIKTNPIM NLNKTTSVDI 660 STVNCHDLKI RIVIGVKNHG LRSGSHVVLV FWKPPKCSKS LVGGGVPLTQ LVGFERVEVG 720 RSMTEKFTVD FDVCKALSLV DTHGKRKLVT GHHKLVIGSN SDQQIYHHLN VRLAGDSTVA 780 I* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 1.0e-53 | 37 | 447 | 427 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-60 | 69 | 349 | 285 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-64 | 397 | 629 | 240 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 1.0e-78 | 110 | 735 | 684 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 23 | 758 | 758 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB02547.1 | 0 | 1 | 778 | 1 | 778 | beta-1,4-xylosidase [Arabidopsis thaliana] |
| EMBL | CAN82161.1 | 0 | 1 | 774 | 1 | 787 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_188596.1 | 0 | 1 | 781 | 1 | 781 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
| RefSeq | XP_002264114.1 | 0 | 1 | 774 | 25 | 811 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002527511.1 | 0 | 23 | 778 | 21 | 789 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 9.80909e-45 | 110 | 770 | 91 | 734 | A Chain A, Fcho2 F-Bar Domain |
| PDB | 3u48_A | 9.80909e-45 | 110 | 770 | 91 | 734 | A Chain A, Fcho2 F-Bar Domain |
| PDB | 3u4a_B | 5.04467e-44 | 110 | 770 | 91 | 734 | A Chain A, Fcho2 F-Bar Domain |
| PDB | 3u4a_A | 5.04467e-44 | 110 | 770 | 91 | 734 | A Chain A, Fcho2 F-Bar Domain |
| PDB | 2x41_A | 4e-36 | 51 | 696 | 3 | 643 | A Chain A, Fcho2 F-Bar Domain |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
