| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G24130.1 |
| Family | CE8 |
| Protein Properties | Length: 336 Molecular Weight: 37271.6 Isoelectric Point: 8.6301 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8711663 End: 8713424 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 34 | 323 | 0 |
| VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSK GKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIF INCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWVKKLSESAIQNLADLSFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 336 Download |
| MGTHRIFIGL IALCCFCLPH LIEAKPFGVY QQQVFVDQSG HGNFTTIQKA IDSVPINNRH 60 WFFINVKAGL YREKIKIPYE KPFIVLVGAG KRLTRVEWDD HYSVAQSPTF STLADNTVVK 120 SITFANSYNF PSKGKMNKNP RTPAVAALIG GDKSAFYSVG FAGIQDTLWD FDGRHYFHRC 180 TIQGAVDFIF GTGQSIYQSC VIQVLGGQLE PGLAGYITAQ GRTNPYDANG FIFINCLVYG 240 TGMAFLGRPW RGYSRVIFYN SNLTDVVVPE GWDAWNFVGH ENQLVFAEHG CFGSGANIGR 300 RVKWVKKLSE SAIQNLADLS FINRGGWVED LPIPA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 5.0e-79 | 36 | 328 | 294 | + Probable pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-79 | 39 | 328 | 303 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 3.0e-81 | 36 | 328 | 293 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 3.0e-102 | 34 | 333 | 301 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 0 | 1 | 333 | 333 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0012505 | endomembrane system |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01354.1 | 0 | 1 | 335 | 1 | 331 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_189055.1 | 0 | 1 | 335 | 1 | 335 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_197400.1 | 0 | 1 | 333 | 1 | 328 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002323773.1 | 0 | 34 | 333 | 1 | 289 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518106.1 | 0 | 34 | 333 | 48 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2e-39 | 34 | 334 | 9 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-30 | 36 | 304 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-20 | 31 | 308 | 30 | 349 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 4e-17 | 29 | 332 | 3 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 4e-17 | 29 | 332 | 3 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
