| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G24330.1 |
| Family | CBM43 |
| Protein Properties | Length: 501 Molecular Weight: 55656.2 Isoelectric Point: 4.4075 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8830336 End: 8831838 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 382 | 462 | 8.3e-25 |
| WCILDPNAYNLDDLPDNIDYACSLSDCTALGYGSSCNHLTATGNVSYAFNMYYQMHDQKTWDCDFLGLGLITDEDPSDELC | |||
| GH17 | 39 | 359 | 0 |
| VGVNWGIMASHQLPPEKVVKMLMDNSFTKLKLFEADQNILDALIGSDIEVMIGIPNRFLKEMAQDTSVAASWVEENVTAYSYNGGVNIKYIAVGNEPFLQ TYNGTYVEFTLPALINIQRALEEADLKNVKVTVPFNADIYFSPEANPVPSAGDFRPELRDATIEIINFLYSHDSPFTVNIYPFLSLYGNAYFPLDFAFFD GTNKSLRDGNLVYTNVFDANLDTLICAMERYSFLGMKIIVGEVGWPTDGDKNANVKSAKRFNQGMVKHAMSGNGTPARKGVIMDVYLFSLVDEDAKSIAP GTFERHWGIFEFDGRPKYELD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 501 Download |
| MAGERSKLTT NHFYNHQIIL CYFLIISQVS IASSNTSNVG VNWGIMASHQ LPPEKVVKML 60 MDNSFTKLKL FEADQNILDA LIGSDIEVMI GIPNRFLKEM AQDTSVAASW VEENVTAYSY 120 NGGVNIKYIA VGNEPFLQTY NGTYVEFTLP ALINIQRALE EADLKNVKVT VPFNADIYFS 180 PEANPVPSAG DFRPELRDAT IEIINFLYSH DSPFTVNIYP FLSLYGNAYF PLDFAFFDGT 240 NKSLRDGNLV YTNVFDANLD TLICAMERYS FLGMKIIVGE VGWPTDGDKN ANVKSAKRFN 300 QGMVKHAMSG NGTPARKGVI MDVYLFSLVD EDAKSIAPGT FERHWGIFEF DGRPKYELDL 360 SGKGNDKPLV PVEDVKYLPK TWCILDPNAY NLDDLPDNID YACSLSDCTA LGYGSSCNHL 420 TATGNVSYAF NMYYQMHDQK TWDCDFLGLG LITDEDPSDE LCEFPVMIDT GDSTRLQPGS 480 SRVLTRVAAA VLVMLVLPIL * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 9.0e-6 | 233 | 351 | 126 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-16 | 381 | 450 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-29 | 381 | 464 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-73 | 39 | 359 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0031225 | anchored to membrane |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28113.1 | 0 | 21 | 496 | 526 | 973 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189076.1 | 0 | 1 | 500 | 1 | 500 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281500.1 | 0 | 21 | 477 | 8 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324967.1 | 0 | 36 | 476 | 6 | 447 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515573.1 | 0 | 24 | 497 | 12 | 488 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 39 | 360 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 39 | 361 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 39 | 361 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 39 | 361 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 39 | 361 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797198 | 448 | 37 | 482 | 0 |
| EX345626 | 313 | 118 | 429 | 0 |
| EX343142 | 311 | 155 | 464 | 0 |
| GO360203 | 286 | 39 | 323 | 0 |
| EX345865 | 296 | 118 | 412 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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