| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G26140.1 |
| Family | GH5 |
| Protein Properties | Length: 509 Molecular Weight: 56546.3 Isoelectric Point: 6.0055 |
| Chromosome | Chromosome/Scaffold: 3 Start: 9559682 End: 9563070 |
| Description | glycosyl hydrolase family 5 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 12 | 324 | 7.39886e-43 |
| IIDEKGQRVKLACVNWPSHLQPVVAEGLSKQSVDDLAKKIMAMGFNCVRFTWPLDLATNETLANNVTVRQSFQSLGLNDDISGFETKNPSMIDLPLIEAY KKVVAKLGNNNVMVILDNHVTKPGWCCGYNDGNGFFGDTFFDPTTWIAGLTKIAMTFKGATNVVGMSLRNELRGPKQNVDDWFKYMQQGAEAVHEANPNV LVILSGLSYDTDLSFVRSRHVNLTFTRKLVFELHRYSFTNTNTWSSKNPNEACGEILKSIENGGGFNLRDFPVFLSEFGIDLRGKNVNDNRYIGCILGWA AENDVDWSIWTLQ | |||
| Full Sequence |
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| Protein Sequence Length: 509 Download |
| MAYPLSTNSR WIIDEKGQRV KLACVNWPSH LQPVVAEGLS KQSVDDLAKK IMAMGFNCVR 60 FTWPLDLATN ETLANNVTVR QSFQSLGLND DISGFETKNP SMIDLPLIEA YKKVVAKLGN 120 NNVMVILDNH VTKPGWCCGY NDGNGFFGDT FFDPTTWIAG LTKIAMTFKG ATNVVGMSLR 180 NELRGPKQNV DDWFKYMQQG AEAVHEANPN VLVILSGLSY DTDLSFVRSR HVNLTFTRKL 240 VFELHRYSFT NTNTWSSKNP NEACGEILKS IENGGGFNLR DFPVFLSEFG IDLRGKNVND 300 NRYIGCILGW AAENDVDWSI WTLQGSYYLR EGVVGMSEFY GILDSDWVRV RSQSFLQRLS 360 LILSPLQGPG SQSKVYNLVF HPLTGLCMLQ SILDPTKVTL GLCNESQPWS YTPQNTLTLK 420 DKSLCLESTG PNAPVKLSET SCSSPNLSEW ETISASNMLL AAKSTNNSLC LDVDETNNLM 480 ASNCKCVKGE DSSCDPISQW FKIVKVSK* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00652 | Ricin_B_lectin | 0.001 | 383 | 479 | 102 | + Ricin-type beta-trefoil lectin domain. | ||
| smart00458 | RICIN | 5.0e-6 | 380 | 484 | 111 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| cd00161 | RICIN | 1.0e-6 | 376 | 484 | 117 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 4.0e-11 | 45 | 323 | 284 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005575 | cellular_component |
| GO:0005975 | carbohydrate metabolic process |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD31066.1 | 0 | 1 | 508 | 1 | 507 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
| RefSeq | NP_172772.2 | 0 | 1 | 508 | 31 | 537 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_189245.1 | 0 | 1 | 508 | 1 | 508 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285424.1 | 0 | 1 | 507 | 25 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002515055.1 | 0 | 2 | 508 | 31 | 535 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 3e-17 | 7 | 294 | 8 | 288 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 3e-17 | 7 | 294 | 8 | 288 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 6e-17 | 7 | 294 | 8 | 288 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 6e-17 | 7 | 294 | 8 | 288 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.0000009 | 20 | 359 | 28 | 375 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CK119337 | 211 | 250 | 460 | 0 |
| DK465433 | 281 | 112 | 391 | 0 |
| DY282456 | 271 | 1 | 271 | 0 |
| FC879052 | 259 | 1 | 259 | 0 |
| EV035501 | 238 | 178 | 414 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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