| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G29090.1 |
| Family | CE8 |
| Protein Properties | Length: 318 Molecular Weight: 35520 Isoelectric Point: 7.0367 |
| Chromosome | Chromosome/Scaffold: 3 Start: 11073703 End: 11075478 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 7 | 297 | 0 |
| VRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQESTGYVFLR CVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDDEAGHFVHHSFVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 318 Download |
| MATTRMVRVS QDGSGDYCSV QDAIDSVPLG NTCRTVIRLS PGIYRQPVYV PKRKNFITFA 60 GISPEITVLT WNNTASKIEH HQASRVIGTG TFGCGSVIVE GEDFIAENIT FENSAPEGSG 120 QAVAIRVTAD RCAFYNCRFL GWQDTLYLHH GKQYLKDCYI EGSVDFIFGN STALLEHCHI 180 HCKSQGFITA QSRKSSQEST GYVFLRCVIT GNGQSGYMYL GRPWGPFGRV VLAYTYMDAC 240 IRNVGWHNWG NAENERSACF YEYRCFGPGS CSSERVPWSR ELMDDEAGHF VHHSFVDPEQ 300 DRPWLCLRMG VKTPYSA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01095 | Pectinesterase | 9.0e-87 | 7 | 279 | 287 | + Pectinesterase. | ||
| PLN02665 | PLN02665 | 6.0e-96 | 2 | 291 | 298 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-98 | 1 | 305 | 307 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-109 | 4 | 305 | 310 | + pectinesterase family protein | ||
| PLN02773 | PLN02773 | 0 | 1 | 317 | 317 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| GO:0045488 | pectin metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08265.1 | 0 | 9 | 317 | 8 | 316 | Pectinesterase [Medicago truncatula] |
| RefSeq | NP_566842.1 | 0 | 1 | 317 | 1 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002283941.1 | 0 | 5 | 317 | 4 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305315.1 | 0 | 4 | 317 | 3 | 316 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530008.1 | 0 | 5 | 317 | 4 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 7 | 278 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 9.80909e-45 | 9 | 309 | 7 | 297 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-24 | 2 | 292 | 1 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-24 | 2 | 292 | 1 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-24 | 2 | 292 | 1 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG480743 | 273 | 1 | 273 | 0 |
| DY292729 | 297 | 6 | 302 | 0 |
| GR994392 | 302 | 4 | 305 | 0 |
| DY292725 | 305 | 6 | 310 | 0 |
| ES794113 | 289 | 3 | 291 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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