Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G53950.1 |
Family | AA5 |
Protein Properties | Length: 546 Molecular Weight: 60004.4 Isoelectric Point: 5.3125 |
Chromosome | Chromosome/Scaffold: 3 Start: 19975619 End: 19977439 |
Description | glyoxal oxidase-related, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 31 | 543 | 0 |
DLPGSWELIVQDAGIASMHTAVTRFNTVILLDRTNIGPSRKALDRHRCRRDPKDAALKRDCYAHSVLFDLGTNQIRPLMIQTDTWCSSGQFLSDGSLLQT GGDKDGFKKIRKFEPCDPNETCDWVELQDTELITGRWYASNQILPDGSVIIVGGRGTNTVEYYPPRENGAVPFQFLADVEDKQMDNLYPYVHLLPDDDGG NLFIFANSRAVKYDHRINAVVKEYPPLDGGPRNYPSGGSSAMLAIQGDFTTAEILICGGAQSGAFTARAIDAPAHGTCGRIVATAADPVWVTEEMPFGRI MGDMVNLPTGEILIINGAQAGSQGFEMGSDPCLYPLLYRPDQPIGLRFMTLNPGTVPRMYHSTANLLPDGRILLAGSNPHYFYKFNAEFPTELRIEAFSP EYLSPDRANLRPEIQEIPQIIRYGEVFDVFVTVPLPVVGIIQMNWGSAPFATHSFSQGQRLVKLTVAPSVPDGVGRYRIQCTAPPNGAVSPPGYYMAFAV NQGVPSIARWIRI |
Full Sequence |
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Protein Sequence Length: 546 Download |
MAELIPWYYT SGSGIVLVLQ TIFLFSIVRA DLPGSWELIV QDAGIASMHT AVTRFNTVIL 60 LDRTNIGPSR KALDRHRCRR DPKDAALKRD CYAHSVLFDL GTNQIRPLMI QTDTWCSSGQ 120 FLSDGSLLQT GGDKDGFKKI RKFEPCDPNE TCDWVELQDT ELITGRWYAS NQILPDGSVI 180 IVGGRGTNTV EYYPPRENGA VPFQFLADVE DKQMDNLYPY VHLLPDDDGG NLFIFANSRA 240 VKYDHRINAV VKEYPPLDGG PRNYPSGGSS AMLAIQGDFT TAEILICGGA QSGAFTARAI 300 DAPAHGTCGR IVATAADPVW VTEEMPFGRI MGDMVNLPTG EILIINGAQA GSQGFEMGSD 360 PCLYPLLYRP DQPIGLRFMT LNPGTVPRMY HSTANLLPDG RILLAGSNPH YFYKFNAEFP 420 TELRIEAFSP EYLSPDRANL RPEIQEIPQI IRYGEVFDVF VTVPLPVVGI IQMNWGSAPF 480 ATHSFSQGQR LVKLTVAPSV PDGVGRYRIQ CTAPPNGAVS PPGYYMAFAV NQGVPSIARW 540 IRIVS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 1.0e-30 | 441 | 543 | 104 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 1.0e-34 | 438 | 543 | 107 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-138 | 48 | 289 | 247 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Gene Ontology | |
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GO Term | Description |
GO:0003674 | molecular_function |
GO:0008150 | biological_process |
GO:0012505 | endomembrane system |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA42922.1 | 0 | 27 | 544 | 8 | 522 | glyoxal oxidase [Vitis pseudoreticulata] |
GenBank | ACV49899.1 | 0 | 27 | 544 | 8 | 522 | glyoxal oxidase [Vitis vinifera] |
RefSeq | NP_190963.1 | 0 | 1 | 545 | 1 | 545 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002274763.1 | 0 | 21 | 544 | 13 | 541 | PREDICTED: similar to glyoxal oxidase [Vitis vinifera] |
RefSeq | XP_002322929.1 | 0 | 16 | 545 | 3 | 528 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eid_A | 1e-17 | 109 | 544 | 221 | 638 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2wq8_A | 4e-17 | 109 | 544 | 243 | 660 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eib_A | 8e-17 | 109 | 544 | 221 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 9e-17 | 109 | 544 | 221 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz1_A | 9e-17 | 109 | 544 | 221 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |