| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G54420.1 |
| Family | GH19 |
| Protein Properties | Length: 274 Molecular Weight: 29435.8 Isoelectric Point: 4.8263 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20145910 End: 20147063 |
| Description | CHIT1 - Chitinase family protein precursor, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 72 | 273 | 0 |
| VAEIVTQEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCYIEEIDGASKDYCDENATQYPCNPNKGYYG RGPIQLSWNFNYGPAGTAIGFDGLNAPETVATDPVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLGVDPGNNL TC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 274 Download |
| MLTPTISKSI SLVTILLVLQ AFSNTTKAQN CGCSSELCCS QFGFCGNTSD YCGVGCQQGP 60 CFAPPPANGV SVAEIVTQEF FNGIISQAAS SCAGNRFYSR GAFLEALDSY SRFGRVGSTD 120 DSRREIAAFF AHVTHETGHF CYIEEIDGAS KDYCDENATQ YPCNPNKGYY GRGPIQLSWN 180 FNYGPAGTAI GFDGLNAPET VATDPVISFK TALWYWTNRV QPVISQGFGA TIRAINGALE 240 CDGANTATVQ ARVRYYTDYC RQLGVDPGNN LTC* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00270 | ChtBD1 | 7.0e-7 | 33 | 59 | 27 | + Chitin binding domain. | ||
| pfam00187 | Chitin_bind_1 | 3.0e-7 | 27 | 61 | 35 | + Chitin recognition protein. | ||
| cd00442 | lysozyme_like | 2.0e-9 | 162 | 241 | 80 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| pfam00182 | Glyco_hydro_19 | 3.0e-97 | 75 | 273 | 232 | + Chitinase class I. | ||
| cd00325 | chitinase_glyco_hydro_19 | 3.0e-103 | 76 | 273 | 230 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0005618 | cell wall |
| GO:0006032 | chitin catabolic process |
| GO:0008061 | chitin binding |
| GO:0009626 | plant-type hypersensitive response |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACM45716.1 | 0 | 7 | 273 | 3 | 272 | class IV chitinase [Pyrus pyrifolia] |
| EMBL | CAA74930.1 | 0 | 1 | 273 | 1 | 274 | class IV chitinase [Arabidopsis thaliana] |
| RefSeq | NP_191010.1 | 0 | 1 | 273 | 1 | 273 | ATEP3; chitinase [Arabidopsis thaliana] |
| RefSeq | XP_002326039.1 | 0 | 16 | 273 | 1 | 258 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330662.1 | 0 | 29 | 273 | 31 | 275 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hbh_A | 0 | 71 | 273 | 1 | 204 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3hbe_X | 0 | 71 | 273 | 1 | 204 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
| PDB | 3hbd_A | 0 | 71 | 273 | 1 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
| PDB | 2z37_D | 0 | 75 | 273 | 6 | 237 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 2z37_C | 0 | 75 | 273 | 6 | 237 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
