| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G54440.1 |
| Family | GH2 |
| Protein Properties | Length: 1108 Molecular Weight: 125412 Isoelectric Point: 5.4995 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20148336 End: 20157138 |
| Description | beta-galactosidase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 87 | 973 | 0 |
| VKSLSGYWKFFLAPKPANVPDKFYDAAFSDSDWNALQVPSNWQCHGFDRPIYTNVVYPFPNDPPYVPEDNPTGCYRTYFQIPKEWKDRRILLHFEAVDSA FFAWINGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVK IDNMQESSKDLVLSNFIIEAAIFDTKNWYNSEGFSCELSPKVANLKLNPSPSPTLGFHGYLLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSI VGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLSGHLKHP AKEPSWAAAMLDRVVGMVERDKNHTCIISWSLGNEAGYGPNHSAMAGWIREKDPSRLVHYEGGGSRTSSTDIVCPMYMRVWDIIKIALDQNESRPLILCE YQHAMGNSNGNIDEYWEAIDNTFGLQGGFIWDWVDQGLLKLGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDRTPHPALHEVKHCYQPIKVSLTDGMIK VANTYFFNTTEELEFSWTIHGDGLELGSGTLSIPVIKPQNSFEMEWKSGPWFSFWNDSNAGELFLTINAKLLNLTRSLEAGHLLSSTQIPLPAKGQIIPQ AIKKTDTSITCETVGDFIKISQKDSWELMVNVRKGTIEGWKIQGVLLMNEAILPCFWRAPTDNDKGGGDSSYFSRWKAAQLDNVEFLVESCSVKSITDKS VEIEFIYLGSSASGSSKSDALFKVNVTYLIYGSGDIITNWFVEPNSDLPPLPRVGIEFHIEKTLDRVEWYGKGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1108 Download |
| MVSLATQMIL PSENGYRVWE DQTLFKWRKR DPHVTLRCHE SVQGALRYWY QRNNVDLTVS 60 KSAVWNDDAV QAALDSAAFW VDGLPFVKSL SGYWKFFLAP KPANVPDKFY DAAFSDSDWN 120 ALQVPSNWQC HGFDRPIYTN VVYPFPNDPP YVPEDNPTGC YRTYFQIPKE WKDRRILLHF 180 EAVDSAFFAW INGNPVGYSQ DSRLPAEFEI SDYCYPWDSG KQNVLAVQVF RWSDGSYLED 240 QDHWWLSGIH RDVLLLAKPK VFIADYFFKS KLADDFSYAD IQVEVKIDNM QESSKDLVLS 300 NFIIEAAIFD TKNWYNSEGF SCELSPKVAN LKLNPSPSPT LGFHGYLLEG KLDSPNLWSA 360 EQPNVYILVL TLKDTSGKVL DSESSIVGIR QVSKAFKQLL VNGHPVVIKG VNRHEHHPRV 420 GKTNIEACMV KDLIMMKEYN INAVRNSHYP QHPRWYELCD LFGMYMIDEA NIETHGFDLS 480 GHLKHPAKEP SWAAAMLDRV VGMVERDKNH TCIISWSLGN EAGYGPNHSA MAGWIREKDP 540 SRLVHYEGGG SRTSSTDIVC PMYMRVWDII KIALDQNESR PLILCEYQHA MGNSNGNIDE 600 YWEAIDNTFG LQGGFIWDWV DQGLLKLGSD GIKRWAYGGD FGDQPNDLNF CLNGLIWPDR 660 TPHPALHEVK HCYQPIKVSL TDGMIKVANT YFFNTTEELE FSWTIHGDGL ELGSGTLSIP 720 VIKPQNSFEM EWKSGPWFSF WNDSNAGELF LTINAKLLNL TRSLEAGHLL SSTQIPLPAK 780 GQIIPQAIKK TDTSITCETV GDFIKISQKD SWELMVNVRK GTIEGWKIQG VLLMNEAILP 840 CFWRAPTDND KGGGDSSYFS RWKAAQLDNV EFLVESCSVK SITDKSVEIE FIYLGSSASG 900 SSKSDALFKV NVTYLIYGSG DIITNWFVEP NSDLPPLPRV GIEFHIEKTL DRVEWYGKGP 960 FECYPDRKAA AHVAIYEHNV GDMHVPYIVP GENGGRTDVR WVTFRNKDGV GIYASTYGSS 1020 SLMQMNASYY TTGELHRATH EEDLIKGQNI EVHLDHKHMG LGGDDSWTPC VHDKFLIPPA 1080 QYSFSLRLCP ITASTSGLNI YKDQLPC* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 5.0e-96 | 810 | 1088 | 280 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 3.0e-112 | 397 | 677 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 3.0e-150 | 87 | 971 | 889 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 17 | 1090 | 1122 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 88 | 1093 | 1010 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB77564.1 | 0 | 1 | 1107 | 1 | 1075 | beta Galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001030858.1 | 0 | 1 | 1107 | 1 | 1108 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | NP_680128.1 | 0 | 1 | 1107 | 1 | 1107 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303929.1 | 0 | 1 | 1105 | 1 | 1111 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1104 | 1 | 1107 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 87 | 1089 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 87 | 1089 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 87 | 1089 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 87 | 1089 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1f4h_D | 0 | 87 | 1089 | 49 | 1019 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 129 | 510 | 0 |
| DK499562 | 275 | 244 | 518 | 0 |
| DK497367 | 260 | 1 | 260 | 0 |
| EL444301 | 297 | 438 | 734 | 0 |
| HO804274 | 47 | 504 | 549 | 0.000000009 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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