| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G54440.3 |
| Family | GH2 |
| Protein Properties | Length: 1121 Molecular Weight: 126827 Isoelectric Point: 5.5638 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20148292 End: 20157067 |
| Description | beta-galactosidase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 100 | 986 | 0 |
| VKSLSGYWKFFLAPKPANVPDKFYDAAFSDSDWNALQVPSNWQCHGFDRPIYTNVVYPFPNDPPYVPEDNPTGCYRTYFQIPKEWKDRRILLHFEAVDSA FFAWINGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVK IDNMQESSKDLVLSNFIIEAAIFDTKNWYNSEGFSCELSPKVANLKLNPSPSPTLGFHGYLLEGKLDSPNLWSAEQPNVYILVLTLKDTSGKVLDSESSI VGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRVGKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLSGHLKHP AKEPSWAAAMLDRVVGMVERDKNHTCIISWSLGNEAGYGPNHSAMAGWIREKDPSRLVHYEGGGSRTSSTDIVCPMYMRVWDIIKIALDQNESRPLILCE YQHAMGNSNGNIDEYWEAIDNTFGLQGGFIWDWVDQGLLKLGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDRTPHPALHEVKHCYQPIKVSLTDGMIK VANTYFFNTTEELEFSWTIHGDGLELGSGTLSIPVIKPQNSFEMEWKSGPWFSFWNDSNAGELFLTINAKLLNLTRSLEAGHLLSSTQIPLPAKGQIIPQ AIKKTDTSITCETVGDFIKISQKDSWELMVNVRKGTIEGWKIQGVLLMNEAILPCFWRAPTDNDKGGGDSSYFSRWKAAQLDNVEFLVESCSVKSITDKS VEIEFIYLGSSASGSSKSDALFKVNVTYLIYGSGDIITNWFVEPNSDLPPLPRVGIEFHIEKTLDRVEWYGKGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 1121 Download |
| MVSLATQMIL PSENGYRVWE DQTLFKWRKR DPHVTLRCHE SVQVSQGRVK ILCDCIGALR 60 YWYQRNNVDL TVSKSAVWND DAVQAALDSA AFWVDGLPFV KSLSGYWKFF LAPKPANVPD 120 KFYDAAFSDS DWNALQVPSN WQCHGFDRPI YTNVVYPFPN DPPYVPEDNP TGCYRTYFQI 180 PKEWKDRRIL LHFEAVDSAF FAWINGNPVG YSQDSRLPAE FEISDYCYPW DSGKQNVLAV 240 QVFRWSDGSY LEDQDHWWLS GIHRDVLLLA KPKVFIADYF FKSKLADDFS YADIQVEVKI 300 DNMQESSKDL VLSNFIIEAA IFDTKNWYNS EGFSCELSPK VANLKLNPSP SPTLGFHGYL 360 LEGKLDSPNL WSAEQPNVYI LVLTLKDTSG KVLDSESSIV GIRQVSKAFK QLLVNGHPVV 420 IKGVNRHEHH PRVGKTNIEA CMVKDLIMMK EYNINAVRNS HYPQHPRWYE LCDLFGMYMI 480 DEANIETHGF DLSGHLKHPA KEPSWAAAML DRVVGMVERD KNHTCIISWS LGNEAGYGPN 540 HSAMAGWIRE KDPSRLVHYE GGGSRTSSTD IVCPMYMRVW DIIKIALDQN ESRPLILCEY 600 QHAMGNSNGN IDEYWEAIDN TFGLQGGFIW DWVDQGLLKL GSDGIKRWAY GGDFGDQPND 660 LNFCLNGLIW PDRTPHPALH EVKHCYQPIK VSLTDGMIKV ANTYFFNTTE ELEFSWTIHG 720 DGLELGSGTL SIPVIKPQNS FEMEWKSGPW FSFWNDSNAG ELFLTINAKL LNLTRSLEAG 780 HLLSSTQIPL PAKGQIIPQA IKKTDTSITC ETVGDFIKIS QKDSWELMVN VRKGTIEGWK 840 IQGVLLMNEA ILPCFWRAPT DNDKGGGDSS YFSRWKAAQL DNVEFLVESC SVKSITDKSV 900 EIEFIYLGSS ASGSSKSDAL FKVNVTYLIY GSGDIITNWF VEPNSDLPPL PRVGIEFHIE 960 KTLDRVEWYG KGPFECYPDR KAAAHVAIYE HNVGDMHVPY IVPGENGGRT DVRWVTFRNK 1020 DGVGIYASTY GSSSLMQMNA SYYTTGELHR ATHEEDLIKG QNIEVHLDHK HMGLGGDDSW 1080 TPCVHDKFLI PPAQYSFSLR LCPITASTSG LNIYKDQLPC * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 3.0e-96 | 823 | 1101 | 280 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 2.0e-112 | 410 | 690 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 1.0e-150 | 100 | 984 | 889 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 98 | 1103 | 1054 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 101 | 1106 | 1010 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB77564.1 | 0 | 1 | 1120 | 1 | 1075 | beta Galactosidase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001030858.1 | 0 | 1 | 1120 | 1 | 1108 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | NP_680128.1 | 0 | 1 | 1120 | 1 | 1107 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| RefSeq | XP_002299206.1 | 0 | 1 | 1119 | 1 | 1109 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 1117 | 1 | 1107 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 100 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 100 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 100 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 100 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz7_D | 0 | 100 | 1102 | 51 | 1021 | A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 142 | 523 | 0 |
| DK499562 | 275 | 257 | 531 | 0 |
| EL444301 | 297 | 451 | 747 | 0 |
| DK497367 | 273 | 1 | 273 | 0 |
| HO804274 | 47 | 517 | 562 | 0.00000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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