| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G55430.1 |
| Family | CBM43 |
| Protein Properties | Length: 450 Molecular Weight: 48442.5 Isoelectric Point: 9.7383 |
| Chromosome | Chromosome/Scaffold: 3 Start: 20549599 End: 20552215 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 366 | 448 | 9.1e-34 |
| WCVARSGATNTQLQDSINWVCGQGVDCKPIQAGGSCFNPSSLRTHASFVMNAYFQSHGRTDGACNFSGTGMIVGNNPSNGACK | |||
| GH17 | 29 | 341 | 0 |
| IGVNYGTLGNLPPPTQVANFIKTQTSIDSVKIFDVNPDILRAFAGTGISVVVTVPNGDIPALANGRQARRWVSVNILPFHPQTKIKYISVGNEILLTGDN NMINNLLPAMRNLNNALVRAGVRDVKVTTAHSLNIIAYDLTGAPSSGRFRPGWDKGILAPILAYHRRTKSPFMVNPYPYFGFDPKNVNFAIFRTPYKAVR DPFTRHVYTNMFDALMDSTYSAMKALGYGDVNIVVGETGWPSACDAPWCSPANAAWFNLNIIKRAQGQGTPLMPNRRFETYIFGLFNEEGKPGPTAERNW GLFRADFSPVYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI 60 FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV SVNILPFHPQ TKIKYISVGN 120 EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG 180 WDKGILAPIL AYHRRTKSPF MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF 240 DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL 300 MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS 360 TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS CFNPSSLRTH ASFVMNAYFQ 420 SHGRTDGACN FSGTGMIVGN NPSNGACKY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.007 | 66 | 334 | 275 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-27 | 365 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-43 | 365 | 449 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-84 | 29 | 341 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76666.1 | 0 | 1 | 449 | 1 | 449 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| GenBank | AAM66982.1 | 0 | 1 | 449 | 1 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_191103.1 | 0 | 1 | 449 | 1 | 449 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002283647.1 | 0 | 9 | 449 | 8 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002530863.1 | 0 | 12 | 449 | 10 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 29 | 331 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 29 | 331 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 29 | 331 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 29 | 331 | 2 | 303 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
