y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G57620.1 |
Family | AA5 |
Protein Properties | Length: 548 Molecular Weight: 61025.6 Isoelectric Point: 6.1889 |
Chromosome | Chromosome/Scaffold: 3 Start: 21337564 End: 21339301 |
Description | glyoxal oxidase-related, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 36 | 547 | 0 |
RWEMLLPSIGISAMHMQLLHNGMVIMFDRTDFGTSNVSLPGGICRYDPTDTAEKFDCSAHSVLYDVVSNTYRPLNVQTDTWCSSGAVLPNGTLVQTGGYN DGERAARMFSPCGYSDTCDWIEFPQYLSQRRWYATNQILPDGRIIVVGGRRQFNYELFPRHDSRSRSSRLEFLRETSDGSNENNLYPFIHLLPDGNLFVF ANTRSIVFDYKKNRIVKEFPEIPGGDPRNYPSSGSSILFPLDDTNDANVEVEIMVCGGSPKGGFSRGFTRATSTCGRLKLSDQSPSWEMETMPLPRVMGD MLLLPTGDVIIVNGAGAGTAGWEKARDPIIQPVIYQPFDHLFTVMSTPSRPRMYHSSAILLPDGRVLVGGSNPHVYYNFTNVEYPTDLSLEAYSPPYLFF TSDPIRPKILLTSDKVLSYKRLFNVDFSIAQFLTVDLLSVRIVAPSFTTHSFAMNQRMVILKLLSVTRDQLTNSYRVSALGPSTAEIAPPGYYMIFLVHA GIPSSAAWVQIE |
Full Sequence |
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Protein Sequence Length: 548 Download |
MINSKNTFIV ATTILCLSMA ILSEGQANPF LLQLDRWEML LPSIGISAMH MQLLHNGMVI 60 MFDRTDFGTS NVSLPGGICR YDPTDTAEKF DCSAHSVLYD VVSNTYRPLN VQTDTWCSSG 120 AVLPNGTLVQ TGGYNDGERA ARMFSPCGYS DTCDWIEFPQ YLSQRRWYAT NQILPDGRII 180 VVGGRRQFNY ELFPRHDSRS RSSRLEFLRE TSDGSNENNL YPFIHLLPDG NLFVFANTRS 240 IVFDYKKNRI VKEFPEIPGG DPRNYPSSGS SILFPLDDTN DANVEVEIMV CGGSPKGGFS 300 RGFTRATSTC GRLKLSDQSP SWEMETMPLP RVMGDMLLLP TGDVIIVNGA GAGTAGWEKA 360 RDPIIQPVIY QPFDHLFTVM STPSRPRMYH SSAILLPDGR VLVGGSNPHV YYNFTNVEYP 420 TDLSLEAYSP PYLFFTSDPI RPKILLTSDK VLSYKRLFNV DFSIAQFLTV DLLSVRIVAP 480 SFTTHSFAMN QRMVILKLLS VTRDQLTNSY RVSALGPSTA EIAPPGYYMI FLVHAGIPSS 540 AAWVQIE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 4.0e-24 | 441 | 546 | 107 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-25 | 437 | 546 | 111 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-155 | 49 | 293 | 245 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Gene Ontology | |
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GO Term | Description |
GO:0003674 | molecular_function |
GO:0008150 | biological_process |
GO:0012505 | endomembrane system |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_191321.1 | 0 | 1 | 547 | 1 | 547 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002271784.1 | 0 | 9 | 547 | 2 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319613.1 | 0 | 36 | 547 | 14 | 529 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328372.1 | 0 | 49 | 547 | 1 | 501 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512263.1 | 0 | 37 | 547 | 36 | 533 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1t2x_A | 0.00000000000005 | 114 | 546 | 225 | 637 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2eic_A | 0.00000000000006 | 114 | 546 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2wq8_A | 0.00000000000007 | 111 | 546 | 244 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eib_A | 0.00000000000008 | 114 | 546 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eid_A | 0.0000000000002 | 114 | 546 | 225 | 637 | A Chain A, Galactose Oxidase W290g Mutant |