| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G58100.1 |
| Family | CBM43 |
| Protein Properties | Length: 181 Molecular Weight: 19170.7 Isoelectric Point: 4.7735 |
| Chromosome | Chromosome/Scaffold: 3 Start: 21515199 End: 21516487 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 41 | 124 | 6.6e-32 |
| WCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 181 Download |
| MIMSLPQCSH LRLSILAATA AMLMVITTAQ IGGQVIQVEL WCVAKNNAED SSLQTAIEWA 60 CGQGGADCGP IQQGGPCNDP TDVQKMASFV FNNYYLKNGE EDEACNFNNN AALTSLNPSQ 120 GTCKYPSSKG ANNGRLADDT SMGAGQADMS RGGRPISSSW MVTFIGFGSL LTMTWIIHHL 180 * 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-20 | 40 | 111 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-35 | 40 | 125 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008150 | biological_process |
| GO:0009506 | plasmodesma |
| GO:0030247 | polysaccharide binding |
| GO:0031225 | anchored to membrane |
| GO:0046658 | anchored to plasma membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM67357.1 | 0 | 1 | 180 | 42 | 220 | unknown [Arabidopsis thaliana] |
| EMBL | CAB68148.1 | 0 | 1 | 180 | 77 | 256 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_567060.1 | 0 | 1 | 180 | 1 | 180 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002279275.1 | 0 | 35 | 177 | 30 | 174 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525141.1 | 1.96182e-44 | 30 | 150 | 22 | 147 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 3e-18 | 41 | 127 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
