| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G61810.1 |
| Family | GH17 |
| Protein Properties | Length: 376 Molecular Weight: 42054.6 Isoelectric Point: 9.761 |
| Chromosome | Chromosome/Scaffold: 3 Start: 22877168 End: 22878469 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 55 | 371 | 0 |
| IGINYGRYGSNLPPPEAIPSLVNSLSIKHVKTFDLDPRITKSFANTGITLSLCIPNDKIPSLATNLSEAESIIRNFILPYHKNTIITAISVGNEVSLLPQ FSNHLVSAMVNVHKAIKRYRLHKKIKVSTTHSLAILSRRFPPSTAVFHQSIGDSVLEPLIRFLQRTNSPLMVNVYPYLAYKQSFPSIPLDFALFQPMNSP RRRRYIDPYTGVAYTNLFDIMLDSVDSAVKSLGLPEIPVVVSEIGWPTRGDPGETAANLENARVFNQRLVEHLRRRWNKVPVYIFALFDEDQKTGNAVEK HWGLLYGNGSRKYDLNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 376 Download |
| MKMILMTTMQ NAFWILLVFS ISMASCSTIP SLVGPQIGIN YGEYSSNLED SSPVIGINYG 60 RYGSNLPPPE AIPSLVNSLS IKHVKTFDLD PRITKSFANT GITLSLCIPN DKIPSLATNL 120 SEAESIIRNF ILPYHKNTII TAISVGNEVS LLPQFSNHLV SAMVNVHKAI KRYRLHKKIK 180 VSTTHSLAIL SRRFPPSTAV FHQSIGDSVL EPLIRFLQRT NSPLMVNVYP YLAYKQSFPS 240 IPLDFALFQP MNSPRRRRYI DPYTGVAYTN LFDIMLDSVD SAVKSLGLPE IPVVVSEIGW 300 PTRGDPGETA ANLENARVFN QRLVEHLRRR WNKVPVYIFA LFDEDQKTGN AVEKHWGLLY 360 GNGSRKYDLN FSPPI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-8 | 291 | 362 | 75 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-93 | 55 | 371 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 9 | 372 | 1 | 346 | beta-1,3-glucanase [Medicago sativa] |
| GenBank | ABK28613.1 | 0 | 1 | 375 | 1 | 375 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_191740.1 | 0 | 1 | 375 | 1 | 375 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_001780506.1 | 0 | 55 | 372 | 31 | 353 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002514201.1 | 0 | 54 | 372 | 25 | 345 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 55 | 371 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 55 | 371 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 55 | 372 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 55 | 372 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_B | 0 | 55 | 372 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
 | |||||
| Start | End | ||||
| 12 | 34 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
 | |||||
| Cleavage Site | |||||
| 26 | |||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DR354112 | 147 | 13 | 159 | 0 |
| CB259129 | 124 | 253 | 376 | 0 |
| CB259129 | 58 | 195 | 252 | 0 |
| BY808987 | 155 | 223 | 376 | 0 |
| CX270921 | 155 | 196 | 350 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Arabidopsis lyrata | 324620 | ||||
| Brassica rapa | Bra003475 | ||||
| Capsella rubella | Carubv10017450m | ||||
| Thellungiella halophila | Thhalv10006482m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |