y
Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT3G62170.1 |
Family | CE8 |
Protein Properties | Length: 589 Molecular Weight: 62957.9 Isoelectric Point: 8.8114 |
Chromosome | Chromosome/Scaffold: 3 Start: 23016223 End: 23018509 |
Description | pectinesterase, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 278 | 571 | 0 |
VVAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA GPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRI IPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWVKVAKSAAEVETYTVANWV |
Full Sequence |
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Protein Sequence Length: 589 Download |
MAVGKVVVSV ASLLLVVGVA IGVITFVNKG GGANGDSNGP INSHQKAVQT ICQSTTDQGS 60 CAKTLDPVKS DDPSKLVKAF LMATKDAITK SSNFTASTEG GMGTNMNATS KAVLDYCKRV 120 LMYALEDLET IVEEMGEDLQ QSGTKLDQLK QWLTGVFNYQ TDCLDDIEEV ELKKIMGEGI 180 SNSKVLTSNA IDIFHSVVTA MAQMGVKVDD MKNITMGAGA GGAARRLLED NDSKGLPKWF 240 SGKDRKLMAK AGRGAPAGGD DGIGEGGGGG GKIKATHVVA KDGSGQFKTI SEAVMACPDK 300 NPGRCIIHIK AGIYNEQVRI PKKKNNIFMF GDGATQTIIT FDRSVKLSPG TTTSLSGTVQ 360 VESEGFMAKW IGFKNTAGPL GHQAVALRVN GDRAVIFNCR FDGYQDTLYV NNGRQFYRNI 420 VVSGTVDFIF GKSATVIQNS LILVRKGSPG QSNYVTADGN EKGAAMKIGI VLHNCRIIPD 480 KELEADKLTI KSYLGRPWKK FATTVIIGTE IGDLIKPEGW TEWQGEQNHK TAKYIEFNNR 540 GPGAATTQRP PWVKVAKSAA EVETYTVANW VGPANWIQEA NVPVQLGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-101 | 42 | 588 | 551 | + pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 4.0e-111 | 25 | 588 | 570 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-133 | 278 | 572 | 297 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 7.0e-139 | 28 | 588 | 584 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02197 | PLN02197 | 0 | 25 | 588 | 579 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0009505 | plant-type cell wall |
GO:0012505 | endomembrane system |
GO:0030599 | pectinesterase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV91510.1 | 0 | 1 | 588 | 1 | 588 | VGD1-like protein 2 [Arabidopsis thaliana] |
GenBank | ABC25451.1 | 0 | 41 | 588 | 39 | 585 | pollen development related protein [Brassica rapa subsp. chinensis] |
RefSeq | NP_191776.1 | 0 | 1 | 588 | 1 | 588 | VGDH2 (Vanguard 1 homolog 2); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | P41510 | 0 | 41 | 588 | 39 | 584 | PME_BRANA RecName: Full=Probable pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase; Flags: Precursor |
Swiss-Prot | Q42608 | 0 | 14 | 588 | 1 | 571 | PME_BRACM RecName: Full=Pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 278 | 588 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 273 | 588 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-24 | 278 | 571 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-24 | 278 | 571 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-23 | 278 | 571 | 7 | 338 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |