| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT3G63010.1 |
| Family | CE10 |
| Protein Properties | Length: 359 Molecular Weight: 40299.7 Isoelectric Point: 7.355 |
| Chromosome | Chromosome/Scaffold: 3 Start: 23289425 End: 23291486 |
| Description | gibberellin receptor GID1L2, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE10 | 66 | 349 | 0 |
| FDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNA LNWVKSRVWLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNP FGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVHSIEDSQS | |||
| Full Sequence |
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| Protein Sequence Length: 359 Download |
| MAGGNEVNLN ECKRIVPLNT WVLISNFKLA YKVLRRPDGS FNRDLAEFLD RKVPANSFPL 60 DGVFSFDHVD STTNLLTRIY QPASLLHQTR HGTLELTKPL STTEIVPVLI FFHGGSFTHS 120 SANSAIYDTF CRRLVTICGV VVVSVDYRRS PEHRYPCAYD DGWNALNWVK SRVWLQSGKD 180 SNVYVYLAGD SSGGNIAHNV AVRATNEGVK VLGNILLHPM FGGQERTQSE KTLDGKYFVT 240 IQDRDWYWRA YLPEGEDRDH PACNPFGPRG QSLKGVNFPK SLVVVAGLDL VQDWQLAYVD 300 GLKKTGLEVN LLYLKQATIG FYFLPNNDHF HCLMEELNKF VHSIEDSQSK SSPVLLTP* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00975 | Thioesterase | 0.001 | 117 | 216 | 105 | + Thioesterase domain. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. | ||
| COG2272 | PnbA | 9.0e-7 | 81 | 197 | 137 | + Carboxylesterase type B [Lipid metabolism] | ||
| PRK10162 | PRK10162 | 2.0e-10 | 75 | 267 | 200 | + acetyl esterase; Provisional | ||
| COG0657 | Aes | 8.0e-36 | 15 | 325 | 316 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 1.0e-74 | 109 | 323 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008152 | metabolic process |
| GO:0009739 | response to gibberellin stimulus |
| GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway |
| GO:0010325 | raffinose family oligosaccharide biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABG89394.1 | 0 | 1 | 342 | 1 | 341 | gibberellic acid receptor [Gossypium hirsutum] |
| GenBank | ACN86356.1 | 0 | 1 | 342 | 1 | 341 | GID1-1 [Gossypium hirsutum] |
| RefSeq | NP_191860.1 | 0 | 1 | 358 | 1 | 358 | GID1B (GA INSENSITIVE DWARF1B); hydrolase [Arabidopsis thaliana] |
| RefSeq | XP_002271700.1 | 0 | 1 | 343 | 1 | 342 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302813.1 | 0 | 1 | 343 | 1 | 342 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2zsi_A | 0 | 1 | 343 | 8 | 350 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 2zsh_A | 0 | 1 | 343 | 8 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_F | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_E | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 3ed1_D | 0 | 2 | 343 | 1 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
| isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
| isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT574934 | 322 | 19 | 340 | 0 |
| HO779605 | 343 | 1 | 343 | 0 |
| ES913054 | 283 | 4 | 286 | 0 |
| HO795605 | 341 | 2 | 341 | 0 |
| BX837624 | 306 | 1 | 306 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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