| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G00550.1 |
| Family | GT4 |
| Protein Properties | Length: 474 Molecular Weight: 53907.4 Isoelectric Point: 7.9041 |
| Chromosome | Chromosome/Scaffold: 4 Start: 237967 End: 240500 |
| Description | digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 226 | 334 | 5.8e-21 |
| EQPFTKGAYYIGKMVWSKGYKELLKLLEKHQKELAELEVDLYGDGEDSEEIKEAARKLDLTVNVYPGRDHADSLFHNYKVFLNPSTTDVVCTTTAEALAM GKIVVCANH | |||
| Full Sequence |
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| Protein Sequence Length: 474 Download |
| MTNQQEQHIA IFTTASIPWL TGTAVNPLFR AAYLANDGER RVTLVIPWLT LKHQKLVYPN 60 SITFSSPSEQ EAYVRQWLEE RVSFRLAFEI RFYPGKFAID KRSILPVGDI SDAIPDEEAD 120 IAVLEEPEHL TWFHHGQKWK TKFNYVIGIV HTNYLEYVKR EKQGRVKAFF LKYLNSWVVG 180 IYCHKVIRLS AATQEYPKSI VCNVHGVNPK FLEIGLRKLE QQKLQEQPFT KGAYYIGKMV 240 WSKGYKELLK LLEKHQKELA ELEVDLYGDG EDSEEIKEAA RKLDLTVNVY PGRDHADSLF 300 HNYKVFLNPS TTDVVCTTTA EALAMGKIVV CANHISNKFF KQFPNCRTYD DGQGFVRATL 360 KALGEQPSQL TEQQRHELSW EAATQRFIKV SDLNRLSRAD SNLSKRSVFA SSSISVGKNL 420 EDMSAYIHFL ASGFEASRTA FGAIPGSLQP DEELCRDLGL SLNTPSPNTR KQD* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 0.0001 | 268 | 333 | 71 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| pfam00534 | Glycos_transf_1 | 8.0e-5 | 268 | 334 | 71 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| COG0438 | RfaG | 2.0e-5 | 8 | 390 | 398 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02846 | PLN02846 | 0 | 3 | 464 | 462 | + digalactosyldiacylglycerol synthase | ||
| PLN02501 | PLN02501 | 0 | 2 | 460 | 468 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006995 | cellular response to nitrogen starvation |
| GO:0008194 | UDP-glycosyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0009707 | chloroplast outer membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC13625.1 | 0 | 1 | 473 | 1 | 389 | F6N23.24 gene product [Arabidopsis thaliana] |
| RefSeq | NP_191964.2 | 0 | 1 | 473 | 1 | 473 | DGD2; UDP-galactosyltransferase/ UDP-glycosyltransferase/ digalactosyldiacylglycerol synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q6DW73 | 0 | 5 | 461 | 3 | 458 | DGDG2_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic |
| RefSeq | XP_002320779.1 | 0 | 3 | 462 | 2 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511814.1 | 0 | 3 | 470 | 2 | 469 | UDP-galactose:MGDG galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.000003 | 227 | 245 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CX109154 | 411 | 54 | 463 | 0 |
| CX195456 | 271 | 117 | 387 | 0 |
| EG466381 | 215 | 1 | 215 | 0 |
| BX840945 | 215 | 1 | 215 | 0 |
| CX109154 | 66 | 5 | 61 | 0.00000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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