CAZyme Information

Basic Information
SpeciesArabidopsis thaliana
Cazyme IDAT4G01040.1
FamilyGH18
Protein PropertiesLength: 431 Molecular Weight: 49142.4 Isoelectric Point: 9.4461
ChromosomeChromosome/Scaffold: 4 Start: 453369 End: 455548
Descriptionchitinase domain-containing protein 1 precursor, putative, expressed
View CDS
External Links
TAIR
Geo Profiles
ATTED-II
NCBI Taxonomy
Plaza
SIGnAL
CAZyDB
Entrez Gene
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181024215.8e-30
  PVLAYITPWNSKGYDMAKIFNSKFTHLSPVWYDLKSQGSGLVLEGRHNADKGWIQELRSRGNALILPRVVLEAIPGEMLNKKKLREKAISLIVTECKEME
  YNGIVLESWSRWAAYGVLHDPDLRKMALKFVKQLGDALHSTSSPRNNQQHMQFMYVVGPPRSEKLQMYDFGPEDLQFLKDSVDGFSLMTYDFSNPQNPGP
  NAPVKWIDLTLKLLLGSSNNIDSNIARKVLLGINFYGNDFVISGDSGGGGAITGRDYLALLQKHKPTFRWDKESGEHLFMYRDDKNIKHAVFYPTLMSIL
  LRLENARLWGIGISIWEIGQ
Full Sequence
Protein Sequence     Length: 431     Download
MARRRRSSAA ESLKRRNDGY ESLCQVVQQD SDRRLITIFV IFFIVIPAVS IAVYKVKFAD    60
RVIQTESSIR QKGIVKTDIN FQEILTEHSK ASENSTRHYD YPVLAYITPW NSKGYDMAKI    120
FNSKFTHLSP VWYDLKSQGS GLVLEGRHNA DKGWIQELRS RGNALILPRV VLEAIPGEML    180
NKKKLREKAI SLIVTECKEM EYNGIVLESW SRWAAYGVLH DPDLRKMALK FVKQLGDALH    240
STSSPRNNQQ HMQFMYVVGP PRSEKLQMYD FGPEDLQFLK DSVDGFSLMT YDFSNPQNPG    300
PNAPVKWIDL TLKLLLGSSN NIDSNIARKV LLGINFYGND FVISGDSGGG GAITGRDYLA    360
LLQKHKPTFR WDKESGEHLF MYRDDKNIKH AVFYPTLMSI LLRLENARLW GIGISIWEIG    420
QGLDYFFDLL * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_181.0e-6103421356+
COG3858COG38583.0e-16180430257+
cd02874GH18_CFLE_spore_hydrolase6.0e-23103430346+
smart00636Glyco_181.0e-30103421357+
cd02876GH18_SI-CLP3.0e-15999430337+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568chitinase activity
GO:0005575cellular_component
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAB61039.10142627434A_IG002N01.31 gene product [Arabidopsis thaliana]
EMBLCBI40499.1014301435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.1014301430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.105743027399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.106543067432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A05543037393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B05543037393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.00000517841988308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.00000517841988308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
3554
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FD9674802401924310
DY274582322233430
FD5755172421904310
DK5242722371954310
EV115045266282920
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny