CAZyme Information

Basic Information
SpeciesArabidopsis thaliana
Cazyme IDAT4G01770.1
FamilyGT77
Protein PropertiesLength: 362 Molecular Weight: 41174.3 Isoelectric Point: 8.4166
ChromosomeChromosome/Scaffold: 4 Start: 764514 End: 766865
Descriptionalpha 1,3-xylosyltransferase, putative, expressed
View CDS
External Links
TAIR
Geo Profiles
ATTED-II
NCBI Taxonomy
Plaza
SIGnAL
CAZyDB
Entrez Gene
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT771213400
  QDKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFLYLEGSHDAYFTDDMPQIKP
  LNHSHDLPHPDRNGETYICSCMIYLRPTNGAKLLMKKWSEELQSQAWSESIRFKANDQPAFNLALNKTAHQVDLYLLSQVAFPTGGLYFKNEAWVQETKG
  KHVIVHNNYIIGYDRKMKRF
Full Sequence
Protein Sequence     Length: 362     Download
MEQKQHILKQ STFSSSPSSY SSISDRPISL LSRNGLLLLL LALVLLLGVL LPWPGSPLFL    60
FPNRLSSSLS PSPQSKWRDY TLAQAARFVA KNGTVIVCAV SSPFLPFLNN WLISVSRQKH    120
QDKVLVIAED YITLYKVNEK WPGHAVLIPP ALDSKTAFSF GSQGFFNFTA RRPQHLLQIL    180
ELGYNVMYND VDMVWLQDPF LYLEGSHDAY FTDDMPQIKP LNHSHDLPHP DRNGETYICS    240
CMIYLRPTNG AKLLMKKWSE ELQSQAWSES IRFKANDQPA FNLALNKTAH QVDLYLLSQV    300
AFPTGGLYFK NEAWVQETKG KHVIVHNNYI IGYDRKMKRF QDYGLWLVDD HALESPLGKL    360
E* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam03407Nucleotid_trans2.0e-48119340227+
Gene Ontology
GO TermDescription
GO:0005783endoplasmic reticulum
GO:0005794Golgi apparatus
GO:0010306rhamnogalacturonan II biosynthetic process
GO:0035252UDP-xylosyltransferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAT67590.1013611361hypothetical protein At4G01770 [Arabidopsis thaliana]
GenBankAAX32892.1013611367putative xylosyltransferase [Arabidopsis thaliana]
RefSeqNP_192084.1013611367RGXT2 (rhamnogalacturonan xylosyltransferase 2); UDP-xylosyltransferase [Arabidopsis thaliana]
RefSeqNP_192086.1013611361RGXT1 (rhamnogalacturonan xylosyltransferase 1); UDP-xylosyltransferase [Arabidopsis thaliana]
RefSeqNP_849279.106236168360unknown protein [Arabidopsis thaliana]
Transmembrane Domains
StartEnd
3655
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EG4267982211423620
EG4206662211423620
EG4200292211423620
EG4269682161473620
EG4200202111523620
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_074_00044.1
Arabidopsis lyrata352664892838490401474813912111
Arabidopsis thalianaAT4G01220.1AT1G56550.1AT4G01750.1AT4G01220.2
Brachypodium distachyonBradi2g26850.1
Brassica rapaBra035432Bra036306Bra000906Bra039864Bra017900
Bra037377Bra000950Bra035431Bra000907
Carica papayaevm.model.supercontig_184.13
Capsella rubellaCarubv10001259mCarubv10001249mCarubv10021691m
Citrus clementinaCiclev10020808mCiclev10022071mCiclev10021218m
Citrus sinensisorange1.1g018302morange1.1g027009morange1.1g021054m
Cucumis sativusCucsa.135840.2Cucsa.135840.1
Eucalyptus grandisEucgr.E00084.1
Fragaria vescamrna09360.1-v1.0-hybrid
Glycine maxGlyma08g09360.1
Gossypium raimondiiGorai.004G154200.4Gorai.007G104400.1Gorai.004G154200.1Gorai.004G154200.5Gorai.004G154200.3
Gorai.004G154200.2
Linum usitatissimumLus10002153Lus10012650Lus10008735
Malus domesticaMDP0000150593MDP0000264889
Manihot esculentacassava4.1_010616mcassava4.1_010633m
Mimulus guttatusmgv1a008876m
Oryza sativaLOC_Os05g32120.1
Panicum virgatumPavirv00063401mPavirv00048789m
Physcomitrella patensPp1s19_296V6.1
Phaseolus vulgarisPhvul.002G188500.1
Picea abiesMA_10233136g0010MA_173768g0010
Populus trichocarpaPotri.014G092400.2Potri.002G166000.1Potri.014G092400.1
Prunus persicappa007793m
Ricinus communis30174.m008682
Setaria italicaSi022588mSi017632m
Selaginella moellendorffii87970
Sorghum bicolorSb09g019070.1
Thellungiella halophilaThhalv10029467mThhalv10015591mThhalv10024021mThhalv10024115mThhalv10028748m
Vitis viniferaGSVIVT01016220001GSVIVT01027019001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny