| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G13600.1 |
| Family | CBM43 |
| Protein Properties | Length: 232 Molecular Weight: 24600 Isoelectric Point: 9.4914 |
| Chromosome | Chromosome/Scaffold: 4 Start: 7911179 End: 7912892 |
| Description | X8 domain containing protein, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 61 | 142 | 2.4e-33 |
| WCVARFDVTSQALQAALDYACAAGADCAPIQPNGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 232 Download |
| MKRKEKTKQK QKRVREVRLH TQTLHSHSFL SFLSYHFPMA LCLQTLSFLL LLLFRSSAAM 60 WCVARFDVTS QALQAALDYA CAAGADCAPI QPNGLCFLPN TVQAHASYAF NSYFQRAAMA 120 PGSCNFAGTS TIAKTDPSYG SCVYPNSVRN AGGSASTTTV GGTPSTTVGN SPMTTLRPPS 180 GTTTSPFGIG GGGLNPQGTT TTTNTDESGS YIINKSTVSI ALFVALLLWF I* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-10 | 61 | 131 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-27 | 61 | 144 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU17645.1 | 0 | 59 | 231 | 28 | 190 | unknown [Glycine max] |
| EMBL | CAB41118.1 | 0 | 1 | 231 | 1 | 256 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_193096.5 | 0 | 1 | 231 | 1 | 231 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002267551.1 | 0 | 59 | 230 | 48 | 214 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518089.1 | 0 | 45 | 149 | 4 | 115 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 9e-25 | 57 | 145 | 9 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
