| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G15210.2 |
| Family | GH14 |
| Protein Properties | Length: 421 Molecular Weight: 47300.7 Isoelectric Point: 5.0964 |
| Chromosome | Chromosome/Scaffold: 4 Start: 8666338 End: 8669470 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 17 | 405 | 0 |
| YVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRD VGDNDPDIYYTNRKGTRDIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKENMADLIEAGVIVDIEVGLGPAGELRYPSYPQSQGWVFPGIGEFQCYDKYL KKDFKEAAAKAGHPEWDLPEDAGEYNDKPEETGFFKKDGTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELT AGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| MATNYNEKLL LNYVPVYVML PLGVVNVENV FADPETLETQ LKRLKEEAGV DGVMVDVWWG 60 IIESKGPKQY DWTAYKTLFQ LIARLGLKIQ AIMSFHQCGG NVGDIVTIPI PQWVRDVGDN 120 DPDIYYTNRK GTRDIEYLSI GVDNLPLFAG RTAVQLYSDY MSSFKENMAD LIEAGVIVDI 180 EVGLGPAGEL RYPSYPQSQG WVFPGIGEFQ CYDKYLKKDF KEAAAKAGHP EWDLPEDAGE 240 YNDKPEETGF FKKDGTYVSE KGKFFMTWYS NKLIFHGDQI LGEANKIFAG LKVNLAAKVS 300 GIHWLYNHHS HAAELTAGYY NLFKRDGYRP IARMLSKHYG ILNFTCLEMK DTDNTAEALS 360 APQELVQEVL SKAWKEGIEV AGENALETYG AKGYNQILLN ARPNGVNPNG LLWRRSEVRA 420 * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 2.0e-120 | 13 | 410 | 401 | + beta-amylase | ||
| PLN00197 | PLN00197 | 6.0e-142 | 14 | 398 | 389 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 4.0e-145 | 13 | 410 | 402 | + beta-amylase | ||
| PLN02803 | PLN02803 | 7.0e-163 | 14 | 411 | 401 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 415 | 415 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005983 | starch catabolic process |
| GO:0012505 | endomembrane system |
| GO:0016161 | beta-amylase activity |
| GO:0080027 | response to herbivore |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA07842.1 | 0 | 1 | 410 | 1 | 410 | beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20736.1 | 0 | 1 | 410 | 1 | 410 | beta-amylase [Raphanus sativus] |
| EMBL | CAB10300.1 | 0 | 1 | 410 | 1 | 411 | beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567460.1 | 0 | 1 | 410 | 1 | 410 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_849389.1 | 0 | 1 | 420 | 1 | 420 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 6 | 410 | 4 | 407 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1q6c_A | 0 | 6 | 410 | 4 | 407 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 6 | 410 | 4 | 407 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 6 | 410 | 4 | 407 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 6 | 410 | 4 | 407 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 407 | 5 | 410 | 0 |
| CK121669 | 247 | 114 | 360 | 0 |
| HO803971 | 318 | 93 | 410 | 0 |
| EE565622 | 256 | 81 | 336 | 0 |
| EE469182 | 241 | 95 | 335 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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