| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G17090.1 |
| Family | GH14 |
| Protein Properties | Length: 549 Molecular Weight: 61353.2 Isoelectric Point: 7.0599 |
| Chromosome | Chromosome/Scaffold: 4 Start: 9604962 End: 9607334 |
| Description | beta-amylase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 89 | 503 | 0 |
| FVMLPLDTVTMSGHLNKPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMNYNWEGYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSVPVLRGRTPIQVYSDFMRSFRERFEGYIGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMK SSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEFFRRDGTWNSEYGKFFMEWYSGKLLEHGDQLLSSAKGIFQGSGAKLSGKVAGIHWHYNTRSHAAEL TAGYYNTRNHDGYLPIAKMFNKHGVVLNFTCMEMKDGEQPEHANCSPEGLVKQVQNATRQAGTELAGENALERYDSSAFGQVVATNRSDSGNGLTAFTYL RMNKRLFEGQNWQQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 549 Download |
| MELTLNSSSS LIKRKDAKSS RNQESSSNNM TFAKMKPPTY QFQAKNSVKE MKFTHEKTFT 60 PEGETLEKWE KLHVLSYPHS KNDASVPVFV MLPLDTVTMS GHLNKPRAMN ASLMALKGAG 120 VEGVMVDAWW GLVEKDGPMN YNWEGYAELI QMVQKHGLKL QVVMSFHQCG GNVGDSCSIP 180 LPPWVLEEIS KNPDLVYTDK SGRRNPEYIS LGCDSVPVLR GRTPIQVYSD FMRSFRERFE 240 GYIGGVIAEI QVGMGPCGEL RYPSYPESNG TWRFPGIGEF QCYDKYMKSS LQAYAESIGK 300 TNWGTSGPHD AGEYKNLPED TEFFRRDGTW NSEYGKFFME WYSGKLLEHG DQLLSSAKGI 360 FQGSGAKLSG KVAGIHWHYN TRSHAAELTA GYYNTRNHDG YLPIAKMFNK HGVVLNFTCM 420 EMKDGEQPEH ANCSPEGLVK QVQNATRQAG TELAGENALE RYDSSAFGQV VATNRSDSGN 480 GLTAFTYLRM NKRLFEGQNW QQLVEFVKNM KEGGHGRRLS KEDTTGSDLY VGFVKGKIAE 540 NVEEAALV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 1.0e-149 | 86 | 510 | 432 | + beta-amylase | ||
| PLN02803 | PLN02803 | 0 | 1 | 548 | 548 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 86 | 522 | 443 | + beta-amylase; Provisional | ||
| pfam01373 | Glyco_hydro_14 | 0 | 89 | 506 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 0 | 86 | 510 | 433 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000024 | maltose biosynthetic process |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005983 | starch catabolic process |
| GO:0007623 | circadian rhythm |
| GO:0009409 | response to cold |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB46051.1 | 0 | 51 | 548 | 1 | 498 | putative beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567523.1 | 0 | 1 | 548 | 1 | 548 | CT-BMY (CHLOROPLAST BETA-AMYLASE); beta-amylase [Arabidopsis thaliana] |
| RefSeq | XP_002282871.1 | 0 | 1 | 548 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 548 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 548 | 1 | 548 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 86 | 510 | 12 | 441 | A Chain A, Solution Structure Of The Hmg Box Like Domain From Human Hypothetical Protein Flj14904 |
| PDB | 1q6c_A | 0 | 86 | 510 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 86 | 510 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 86 | 510 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 86 | 510 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 449 | 86 | 534 | 0 |
| HO794833 | 412 | 124 | 535 | 0 |
| HO781538 | 405 | 30 | 433 | 0 |
| HO825836 | 375 | 160 | 534 | 0 |
| EG494319 | 268 | 1 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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