| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G19380.1 |
| Family | AA3 |
| Protein Properties | Length: 727 Molecular Weight: 80067.9 Isoelectric Point: 7.9458 |
| Chromosome | Chromosome/Scaffold: 4 Start: 10568365 End: 10572412 |
| Description | alcohol oxidase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 206 | 711 | 0 |
| QKRNTNGSSISDPVMKIQCDAVVVGSGSGGGVAAGVLAKAGYKVLVIESGNYYARSKLSLLEGQAMDDMYLSGGLLATSDTNVVILAGSTVGGGSTINWS ASIKTPEHVMKEWAEKSKLEMFGSDLYREAMDVVCKRMGVQCGFVEEGFNNEVLRKGCEKLGLPVKNIPRNAPSDHYCGFCCLGCKKGQKQGTSETWLVD LVESDNGLILPGCQATEVMYDCEQGKKKKATGVAFAFGEEIYVVESRVTIVACGALRTPHLLKRSGLKNSNIGRNLCLHPVVMAWGWFPEEDKWPEKKKK SYEGGIMTAMSSVVIEETHSSYGEMVIQTPALHPGMFSGIIPWTSSKDFKTRMLKFSRTAHIFALLRDKGTGTIDSKTYIDYNLNDEDEESLKNGLERVL KILAAAGAEEIGTHHSEGRSLNVRTASSLEIERFVREESSKPLKDLSGQICSAHQMGSCRMGIRPEESAVRPTGETWEVERLFVADTSVFPTALGVNPMV TVQSIA | |||
| Full Sequence |
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| Protein Sequence Length: 727 Download |
| MESLVAICDT FISSIDDSGV GHVDDCVAGY FSASASQTGT PDRVARLMSE RLHHPKKWIL 60 RAGLWLLSTW IGSLVLCGWR SFTGEFPYFR RFCRLPEKRR EEILLNWSSS YFSLLRMLFR 120 TIKLISALVF FTQVDEKGRN LAWKAIGYNG PSPDHSDHEV ELNEEKKKKK PEEIFGPLYN 180 GIVDLKSPRE AVEKKLAGRG FAVSNQKRNT NGSSISDPVM KIQCDAVVVG SGSGGGVAAG 240 VLAKAGYKVL VIESGNYYAR SKLSLLEGQA MDDMYLSGGL LATSDTNVVI LAGSTVGGGS 300 TINWSASIKT PEHVMKEWAE KSKLEMFGSD LYREAMDVVC KRMGVQCGFV EEGFNNEVLR 360 KGCEKLGLPV KNIPRNAPSD HYCGFCCLGC KKGQKQGTSE TWLVDLVESD NGLILPGCQA 420 TEVMYDCEQG KKKKATGVAF AFGEEIYVVE SRVTIVACGA LRTPHLLKRS GLKNSNIGRN 480 LCLHPVVMAW GWFPEEDKWP EKKKKSYEGG IMTAMSSVVI EETHSSYGEM VIQTPALHPG 540 MFSGIIPWTS SKDFKTRMLK FSRTAHIFAL LRDKGTGTID SKTYIDYNLN DEDEESLKNG 600 LERVLKILAA AGAEEIGTHH SEGRSLNVRT ASSLEIERFV REESSKPLKD LSGQICSAHQ 660 MGSCRMGIRP EESAVRPTGE TWEVERLFVA DTSVFPTALG VNPMVTVQSI AYCIGLNVVD 720 VLKKKK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.009 | 635 | 697 | 64 | + choline dehydrogenase; Validated | ||
| PRK02106 | PRK02106 | 0.0008 | 391 | 493 | 132 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 7.0e-22 | 585 | 714 | 130 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-27 | 247 | 712 | 517 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-87 | 271 | 486 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0009055 | electron carrier activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA18625.1 | 2e-17 | 1 | 44 | 43 | 86 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA18625.1 | 0 | 133 | 726 | 85 | 678 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_193673.2 | 0 | 1 | 726 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 1 | 726 | 40 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 1 | 726 | 1 | 745 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.000000001 | 359 | 726 | 170 | 530 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.000000001 | 359 | 726 | 170 | 530 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.000000004 | 359 | 726 | 170 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.000000004 | 359 | 726 | 170 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.000000004 | 359 | 726 | 170 | 530 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DC883850 | 459 | 271 | 722 | 0 |
| BX836801 | 307 | 365 | 671 | 0 |
| BX841281 | 298 | 29 | 326 | 0 |
| BX836801 | 51 | 672 | 722 | 1e-21 |
| BX841281 | 31 | 1 | 31 | 0.00000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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