| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G20800.1 |
| Family | AA7 |
| Protein Properties | Length: 529 Molecular Weight: 58846.7 Isoelectric Point: 9.4364 |
| Chromosome | Chromosome/Scaffold: 4 Start: 11139609 End: 11141311 |
| Description | reticuline oxidase-like protein precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 78 | 522 | 0 |
| AIVAAKHESHVQATVVCAKSNGIQIRIRSGGHDYEGLSFTSSVPFVILDMHDLRSITIDVFRKQAWVDAGATMGELYTKIAAASKTLAFAGGVCPTLGAG GHISGGGYGNLIRKYGISVDHVVDARIVDVNGNILTGATLGRDLLWAIRGGGGASFGVILSWKINLVDVPKTVTVFKVNKTLEQGVTDVLYKWQLVSSKL PQDLFLRAMPKPVNGVVPSEKTIAVVFYAQFLGSARRLMAIMNKNLPELGLKREDCYEMSWINTTTFWQNYPVGTSTSVLLDRPSGPAGAFYKSKSDYVK KPIPKEEMEKIWKAMLKFNNMWMQWNPYGGVMDKIPADATAFPHRKGNLFKIQYFALWTDANATYANLGLMRDIYHEMEPYVSSNPREAFLNYRDIDVGS NPSGETNLEEAKIYGSKYFLGNFKRLMEVKAKYDPENFFRFEQSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 529 Download |
| MKEVVYVLLL VLLVSVSDAN ETKPNIENFL RCLRNRTNPK NPIAEAIYTH ENSTFASSYV 60 SYTNNKRCLN PNDTKLIAIV AAKHESHVQA TVVCAKSNGI QIRIRSGGHD YEGLSFTSSV 120 PFVILDMHDL RSITIDVFRK QAWVDAGATM GELYTKIAAA SKTLAFAGGV CPTLGAGGHI 180 SGGGYGNLIR KYGISVDHVV DARIVDVNGN ILTGATLGRD LLWAIRGGGG ASFGVILSWK 240 INLVDVPKTV TVFKVNKTLE QGVTDVLYKW QLVSSKLPQD LFLRAMPKPV NGVVPSEKTI 300 AVVFYAQFLG SARRLMAIMN KNLPELGLKR EDCYEMSWIN TTTFWQNYPV GTSTSVLLDR 360 PSGPAGAFYK SKSDYVKKPI PKEEMEKIWK AMLKFNNMWM QWNPYGGVMD KIPADATAFP 420 HRKGNLFKIQ YFALWTDANA TYANLGLMRD IYHEMEPYVS SNPREAFLNY RDIDVGSNPS 480 GETNLEEAKI YGSKYFLGNF KRLMEVKAKY DPENFFRFEQ SIPPASAM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam08031 | BBE | 4.0e-16 | 466 | 523 | 58 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. | ||
| COG0277 | GlcD | 5.0e-18 | 78 | 525 | 467 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam01565 | FAD_binding_4 | 3.0e-20 | 78 | 213 | 137 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0012505 | endomembrane system |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK93677.1 | 0 | 18 | 528 | 18 | 530 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_173966.1 | 0 | 1 | 528 | 1 | 528 | FAD-binding domain-containing protein [Arabidopsis thaliana] |
| RefSeq | NP_193812.1 | 0 | 1 | 528 | 1 | 528 | FAD-binding domain-containing protein [Arabidopsis thaliana] |
| RefSeq | NP_564244.1 | 0 | 1 | 524 | 1 | 524 | FAD-binding domain-containing protein [Arabidopsis thaliana] |
| RefSeq | NP_564245.1 | 0 | 18 | 528 | 18 | 530 | FAD-binding domain-containing protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vte_A | 0 | 27 | 524 | 5 | 512 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
| PDB | 4dns_B | 0 | 27 | 524 | 11 | 495 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 27 | 524 | 11 | 495 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_B | 0 | 27 | 524 | 9 | 495 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 0 | 27 | 524 | 9 | 495 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cannabinoid biosynthesis | RXN-7854 | EC-1.21.3 | tetrahydrocannabinolic acid synthase |
