| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G24260.1 |
| Family | GH9 |
| Protein Properties | Length: 621 Molecular Weight: 69585 Isoelectric Point: 9.0795 |
| Chromosome | Chromosome/Scaffold: 4 Start: 12577871 End: 12580133 |
| Description | endoglucanase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 108 | 583 | 0 |
| NYTIALRTALKFFNAQQSGKLPKNIYNVSWRHDSCLQDGKGDPGQCYKDLVGGYYDAGDSIKFNFPMSYAMTMLSWSVIEYSAKYQAAGELEHVKELIKW GTDYFLKTFNSSADNIYVMVEQVGSGVSGRGSELHNDHYCWMRPEDIHYKRTVSQCYSSCSDLAAEMAAALASASIVFKDNRLYSKNLVHGAKTLYRFAT TSRNRYSQNGKESSKFYNSSMFEDELLWGGAWLYYATGNVTYLERVTSHHMAEKAGAFGNSPYYGVFSWDNKLPGAQLLLTRMRLFLSPGYPYEDMLSEF HNQTGRVMCSYLPYYKKFNRTNGGLIQLNHGAPQPLQYVANAAFLAALFSDYLEAADTPGWYCGPNFYTTEFLRNFSRSQIDYILGKNPRKMSYVVGYGQ RYPKQVHHRGASIPKNMKETCTGGFKWKKSKKNNPNAINGAMVAGPDKHDGFHDIRTNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 621 Download |
| MYGRDPWGGP LEINAADSMT DDDRSRNLQD LDRATPSRPL DETQQSWLLG PKVLKKKKYV 60 DLGCILVSRK IFLWTLGTIV VTALLSGFIT LIVKTLPHHH HKEPPPDNYT IALRTALKFF 120 NAQQSGKLPK NIYNVSWRHD SCLQDGKGDP GQCYKDLVGG YYDAGDSIKF NFPMSYAMTM 180 LSWSVIEYSA KYQAAGELEH VKELIKWGTD YFLKTFNSSA DNIYVMVEQV GSGVSGRGSE 240 LHNDHYCWMR PEDIHYKRTV SQCYSSCSDL AAEMAAALAS ASIVFKDNRL YSKNLVHGAK 300 TLYRFATTSR NRYSQNGKES SKFYNSSMFE DELLWGGAWL YYATGNVTYL ERVTSHHMAE 360 KAGAFGNSPY YGVFSWDNKL PGAQLLLTRM RLFLSPGYPY EDMLSEFHNQ TGRVMCSYLP 420 YYKKFNRTNG GLIQLNHGAP QPLQYVANAA FLAALFSDYL EAADTPGWYC GPNFYTTEFL 480 RNFSRSQIDY ILGKNPRKMS YVVGYGQRYP KQVHHRGASI PKNMKETCTG GFKWKKSKKN 540 NPNAINGAMV AGPDKHDGFH DIRTNYNYTE PTLAGNAGLV AALVALSGEK AVGGIDKNTM 600 FSAVPPLVMA TPPPPAPWTP * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 7.0e-109 | 108 | 571 | 475 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-109 | 84 | 571 | 500 | + endoglucanase | ||
| PLN02340 | PLN02340 | 9.0e-112 | 108 | 572 | 479 | + endoglucanase | ||
| PLN02345 | PLN02345 | 2.0e-139 | 112 | 572 | 468 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-154 | 108 | 572 | 471 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009624 | response to nematode |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK59818.1 | 0 | 1 | 604 | 1 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
| GenBank | AAN72232.1 | 0 | 1 | 604 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 604 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_194157.1 | 0 | 1 | 609 | 1 | 609 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_199783.1 | 0 | 1 | 604 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 1ksc_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 1ks8_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 96 | 589 | 9 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 105 | 589 | 2 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
