| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G26830.1 |
| Family | CBM43 |
| Protein Properties | Length: 456 Molecular Weight: 49346.2 Isoelectric Point: 8.1026 |
| Chromosome | Chromosome/Scaffold: 4 Start: 13494572 End: 13496487 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 367 | 450 | 2e-33 |
| WCVSNGEVAKEKLQEALDYACGEGGADCRPIQPGATCYHPESLEAHASYAFNSYYQKNSRRVGTCFFGGAAHVVTQPPRYGKCE | |||
| GH17 | 25 | 343 | 0 |
| VGVNYGRIANNLPSPEKVVNLLKSQGINRIKIFDTDKNVLTALANSKIKVIVALPNELLSSAASHQSFADNWIKTHIMPYFPATEIEAIAVGNEVFVDPT ITPYLVNAMKNIHTSLVKYKLDKAIKISSPIALSALANSYPPSSGSFKPELIEPVVKPMLALLQQTSSYLMVNAYPFFAYAANADKISLDYALFKENAGN IDSGTGLKYNSLFDAQIDAVYAALSAVGFKGVKVMVTETGWPSVGDENEIGASESNAAAYNAGLVKRVLTGKGTPLRPTEPLNVYLFALFNENQKPGPTS ERNYGLFYPNEGKVYNVPF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 456 Download |
| MAVSFLPYFL ILSFLSAIDA HSGMVGVNYG RIANNLPSPE KVVNLLKSQG INRIKIFDTD 60 KNVLTALANS KIKVIVALPN ELLSSAASHQ SFADNWIKTH IMPYFPATEI EAIAVGNEVF 120 VDPTITPYLV NAMKNIHTSL VKYKLDKAIK ISSPIALSAL ANSYPPSSGS FKPELIEPVV 180 KPMLALLQQT SSYLMVNAYP FFAYAANADK ISLDYALFKE NAGNIDSGTG LKYNSLFDAQ 240 IDAVYAALSA VGFKGVKVMV TETGWPSVGD ENEIGASESN AAAYNAGLVK RVLTGKGTPL 300 RPTEPLNVYL FALFNENQKP GPTSERNYGL FYPNEGKVYN VPFTKKSTTP VNGNRGKVPV 360 THEGHTWCVS NGEVAKEKLQ EALDYACGEG GADCRPIQPG ATCYHPESLE AHASYAFNSY 420 YQKNSRRVGT CFFGGAAHVV TQPPRYGKCE FPTGH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-5 | 45 | 334 | 298 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-24 | 366 | 438 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-38 | 366 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-96 | 25 | 343 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL77689.1 | 0 | 20 | 455 | 22 | 460 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
| GenBank | AAM66024.1 | 0 | 20 | 455 | 22 | 460 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| EMBL | CAB36529.1 | 0 | 1 | 445 | 1 | 445 | putative beta-1, 3-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_194413.2 | 0 | 1 | 455 | 1 | 455 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_568822.1 | 0 | 20 | 455 | 22 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 25 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 25 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 25 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 25 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 25 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
