| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G29360.1 |
| Family | CBM43 |
| Protein Properties | Length: 535 Molecular Weight: 57659.2 Isoelectric Point: 4.7596 |
| Chromosome | Chromosome/Scaffold: 4 Start: 14451421 End: 14453915 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 391 | 473 | 1.1e-29 |
| WCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNC | |||
| GH17 | 27 | 345 | 0 |
| IGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPD NATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSSQV VDPATGLLYSNMFDAQLDAIYFALTAMSFKTVKVMVTESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIES ERNWGMFYANGTNVYALDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 535 Download |
| MGQRLNLVFW IFVSILAFLN FGMASKIGIC YGRNADNLPS PNRVSELIQH LNIKFVRIYD 60 ANIDVLKAFA NTGIELMIGV PNADLLAFAQ FQSNVDTWLS NNILPYYPST KITSISVGLE 120 VTEAPDNATG LVLPAMRNIH TALKKSGLDK KIKISSSHSL AILSRSFPPS SASFSKKHSA 180 FLKPMLEFLV ENESPFMIDL YPYYAYRDST EKVPLEYALF ESSSQVVDPA TGLLYSNMFD 240 AQLDAIYFAL TAMSFKTVKV MVTESGWPSK GSPKETAATP ENALAYNTNL IRHVIGDPGT 300 PAKPGEEIDV YLFSLFNENR KPGIESERNW GMFYANGTNV YALDFTGENT TPVSPTNSTT 360 GTSPSPSSSP IINGNSTVTI GGGGGGGTKK WCIASSQASV TELQTALDWA CGPGNVDCSA 420 VQPDQPCFEP DTVLSHASYA FNTYYQQSGA SSIDCSFNGA SVEVDKDPSY GNCLYMIAPA 480 TDGFNRTMAG NITGNITAID SPLASPSSTN EAFRQMVVAV SVLLPCFVVC SSIW* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-6 | 257 | 336 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-18 | 390 | 460 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-37 | 390 | 475 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-96 | 27 | 345 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0031225 | anchored to membrane |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 9 | 493 | 5 | 468 | beta-1,3-glucanase [Medicago sativa] |
| EMBL | CAB79694.1 | 0 | 23 | 534 | 1 | 512 | beta-1, 3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_567828.3 | 0 | 1 | 469 | 1 | 469 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_849556.1 | 0 | 1 | 534 | 1 | 534 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002514201.1 | 0 | 1 | 494 | 1 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 27 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 27 | 346 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 27 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 27 | 346 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
