| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G31140.1 |
| Family | CBM43 |
| Protein Properties | Length: 485 Molecular Weight: 52715.3 Isoelectric Point: 6.053 |
| Chromosome | Chromosome/Scaffold: 4 Start: 15141200 End: 15143391 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 447 | 1.1e-24 |
| WCILAPNANLQDPQLGPSVSYACDHADCTSLGYGSSCGNLNLAQNVSYAFNSYYQVSNQLDSACKFPGLSIVSTRDPSVGSCK | |||
| GH17 | 27 | 345 | 0 |
| IGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLK AFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLNIVKFLSDNGAPFTINIYPFISLYNDPNFPVEFAFFDG TGTPINDNGRIYDNVLDANYDTLVWSLQKNGFGNLTIIVGEVGWPTDGDKNANLMYARRYNQGFMNRQKANKGTPMRPGAMDAYLFGLIDEDAKSIQPGN FERHWGIFYIDGQPKYQLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MLFKGVFAVF FVITLLYASL LIEVEGIGVN WGSQARHPLP PATVVRLLRE NGIQKVKLFE 60 ADSAILKALS RTGIQVMVGI PNDLLAPLAG SVAAAERWVS QNVSAHVSSN GVDIRYVAVG 120 NEPFLKAFNG TFEGITLPAL QNIQSAIIKA GLATQVKVTV PLNADVYQSA SNLPSDGDFR 180 PEIRDLMLNI VKFLSDNGAP FTINIYPFIS LYNDPNFPVE FAFFDGTGTP INDNGRIYDN 240 VLDANYDTLV WSLQKNGFGN LTIIVGEVGW PTDGDKNANL MYARRYNQGF MNRQKANKGT 300 PMRPGAMDAY LFGLIDEDAK SIQPGNFERH WGIFYIDGQP KYQLSLGSGN GLIPAKDVHY 360 LAKKWCILAP NANLQDPQLG PSVSYACDHA DCTSLGYGSS CGNLNLAQNV SYAFNSYYQV 420 SNQLDSACKF PGLSIVSTRD PSVGSCKFKI MIKSEDASEA SAMMPITRST AVLLLLSICL 480 YIVL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 259 | 337 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-15 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-29 | 364 | 448 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-76 | 27 | 345 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005773 | vacuole |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_194843.1 | 0 | 1 | 484 | 1 | 484 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002324127.1 | 0 | 23 | 455 | 37 | 473 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330836.1 | 0 | 2 | 476 | 4 | 491 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 19 | 453 | 3 | 443 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528007.1 | 0 | 22 | 462 | 24 | 466 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 27 | 346 | 1 | 306 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1aq0_B | 0 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 27 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 27 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
