| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G33810.1 |
| Family | GH10 |
| Protein Properties | Length: 530 Molecular Weight: 60443.8 Isoelectric Point: 6.5318 |
| Chromosome | Chromosome/Scaffold: 4 Start: 16213324 End: 16215594 |
| Description | glycosyl hydrolase family 10 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 170 | 431 | 0 |
| QTKPSFLLGCAMNFRILQSEGYRNWFASRFKITSFTNEMKWYTTEKERGHENYTAADSMLKFAEENGILVRGHTVLWDDPLMQPTWVPKIEDPNDLMNVT LNRINSVMTRYKGKLTGWDVVNENVHWDYFEKMLGANASSSFYNLAFKLDPDVTMFVNEYNTIENRVEVTATPVKVKEKMEEILAYPGNMNIKGAIGAQG HFRPTQPNLAYMRSALDTLGSLGLPIWLTEVDMPKCPNQEVYIEEILREAYSHPAVKGIIIF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 530 Download |
| MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE 60 GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD VSGSVDIFFE SDDKEAKISA 120 SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA 180 MNFRILQSEG YRNWFASRFK ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR 240 GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE 300 KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN 360 IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV DMPKCPNQEV YIEEILREAY 420 SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE 480 NDEEEVSLLH GHYNVNVSHP WMKNMSTSFS LEVTKEMGQR QVVRVVINA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 6.0e-32 | 206 | 402 | 209 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-48 | 172 | 428 | 283 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-82 | 208 | 458 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ65190.1 | 0 | 1 | 529 | 1 | 529 | At2g14690 [Arabidopsis thaliana] |
| EMBL | CAA19864.1 | 0 | 1 | 496 | 1 | 513 | putative protein [Arabidopsis thaliana] |
| EMBL | CAB80099.1 | 0 | 1 | 529 | 1 | 546 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_195107.1 | 0 | 1 | 529 | 1 | 536 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_680761.1 | 0 | 1 | 529 | 41 | 570 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 6e-28 | 138 | 402 | 7 | 240 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 2e-27 | 206 | 402 | 47 | 240 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 2e-27 | 206 | 402 | 47 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 4e-27 | 206 | 402 | 47 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 5e-27 | 206 | 402 | 47 | 240 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV212677 | 227 | 182 | 408 | 0 |
| EV212989 | 218 | 145 | 362 | 0 |
| ES830806 | 293 | 56 | 347 | 0 |
| DV141191 | 251 | 166 | 416 | 0 |
| EX266128 | 276 | 190 | 465 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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