| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G33820.1 |
| Family | GH10 |
| Protein Properties | Length: 571 Molecular Weight: 64940.9 Isoelectric Point: 7.1717 |
| Chromosome | Chromosome/Scaffold: 4 Start: 16217004 End: 16219525 |
| Description | glycosyl hydrolase family 10 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 210 | 472 | 0 |
| QTKSSFLLGCGMNFRILQSQGYRKWFASRFKITSFTNEMKWYATEKARGQENYTVADSMLKFAEDNGILVRGHTVLWDNPKMQPSWVKNIKDPNDVMNVT LNRINSVMKRYKGKLTGWDVVNENLHWDYFEKMLGANASTSFYNLAFKIDPDVRLFVNEYNTIENTKEFTATPIKVKKMMEEILAYPGNKNMKGAIGAQG HFGPTQPNLAYIRSALDTLGSLGLPIWLTEVDMPKCPNQAQYVEDILREAYSHPAVKGIIIFG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 571 Download |
| MNSIKNGFFL CMIFLLWCHV DSGVSIDPFS HSHSLNTECV MKPPRSSETK GLLQFSRSLE 60 DDSDEEWKID GNGFIREMAQ RIQLHQGNIY SFSAWVKLRE GNDKKVGVVF RTENGRLVHG 120 GEVRANQECW TLLKGGIVPD FSGPVDIFFE SENRGAKISA HNVLLKQFSK EEWKLKQDQL 180 IEKIRKSKVR FEVTYENKTA VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK 240 ITSFTNEMKW YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK 300 DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS FYNLAFKIDP 360 DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN MKGAIGAQGH FGPTQPNLAY 420 IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ YVEDILREAY SHPAVKGIII FGGPEVSGFD 480 KLTLADKDFN NTQTGDVIDK LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH 540 PWIANLSTSF SLEVTKEMDQ DQVIRVVISA * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 8.0e-36 | 246 | 472 | 247 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-53 | 207 | 472 | 288 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 1.0e-87 | 248 | 498 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0043169 | cation binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA19864.1 | 0 | 41 | 537 | 1 | 513 | putative protein [Arabidopsis thaliana] |
| EMBL | CAB80099.1 | 0 | 41 | 570 | 1 | 546 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_179076.3 | 0 | 26 | 570 | 27 | 570 | endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_195107.1 | 0 | 41 | 570 | 1 | 536 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_680761.1 | 0 | 1 | 570 | 1 | 570 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 4e-30 | 217 | 502 | 27 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 7e-28 | 217 | 490 | 27 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 7e-28 | 217 | 490 | 27 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-27 | 217 | 490 | 27 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 3e-27 | 217 | 490 | 27 | 289 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
