| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G33860.1 |
| Family | CBM22 |
| Protein Properties | Length: 577 Molecular Weight: 65211 Isoelectric Point: 8.751 |
| Chromosome | Chromosome/Scaffold: 4 Start: 16229948 End: 16232334 |
| Description | glycosyl hydrolase family 10 protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 46 | 161 | 5.4e-21 |
| IIVSPDVRDGTLGWTPFGNAKVDFRKIGNHNFFVARDRKQPFDSVSQKVYLEKGLLYTFSAWLQVSKGKAPVKAVFKKNGEYKLAGSVVAESKCWSMLKG GLTVDESGPAELYFES | |||
| GH10 | 222 | 480 | 0 |
| KLGFPFGCEVEKNILGNKAYQNWFTQRFTVTTFANEMKWYSTEVVRGKEDYSTADAMLRFFKQHGVAVRGHNILWNDPKYQPKWVNALSGNDLYNAVKRR VFSVVSRYKGQLAGWDVVNENLHFSYFEDKMGPKASYNIFKMAQAFDPTTTMFMNEYNTLEESSDSDSSLARYLQKLREIRSIRVCGNISLGIGLESHFK TPNIPYMRSALDTLAATGLPIWLTEVDVEAPPNVQAKYFEQVLREGHAHPQVKGIVTWS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVSP DVRDGTLGWT 60 PFGNAKVDFR KIGNHNFFVA RDRKQPFDSV SQKVYLEKGL LYTFSAWLQV SKGKAPVKAV 120 FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ 180 EEWNSHHEQS IQKERKRTVR IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA 240 YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK 300 YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI 360 FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE IRSIRVCGNI SLGIGLESHF 420 KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS 480 GYSPSGCYRM CLTDGNFKNV PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD 540 LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 4.0e-6 | 54 | 164 | 121 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 1.0e-30 | 249 | 479 | 252 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-47 | 225 | 479 | 273 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 6.0e-82 | 258 | 506 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0012505 | endomembrane system |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA19866.1 | 0 | 26 | 576 | 119 | 669 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19866.1 | 0 | 398 | 505 | 2 | 109 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19868.1 | 0 | 37 | 576 | 22 | 574 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_195110.3 | 0 | 16 | 576 | 16 | 576 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_195112.2 | 0 | 1 | 576 | 1 | 576 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-30 | 227 | 506 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_B | 8e-27 | 212 | 479 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_A | 8e-27 | 212 | 479 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3j_A | 8e-27 | 212 | 479 | 1 | 266 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3i_A | 8e-27 | 212 | 479 | 1 | 266 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
