| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G36400.1 |
| Family | AA4 |
| Protein Properties | Length: 560 Molecular Weight: 61445.5 Isoelectric Point: 6.9793 |
| Chromosome | Chromosome/Scaffold: 4 Start: 17197212 End: 17200907 |
| Description | FAD-linked oxidoreductase protein, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA4 | 100 | 321 | 1.7e-22 |
| VSYFKEILGEKNVVEDKERLETANTDWMHKYKGSSKLMLLPKNTQEVSQILEYCDSRRLAVVPQGGNTGLVGGSVPVFDEVIVNVGLMNKILSFDEVSGV LVCEAGCILENLATFLDTKGFIMPLDLGAKGSCHIGGNVSTNAGGLRLIRYGSLHGTVLGLEAVTANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIV TKVSILTQPKLSSVNLAFIACK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 560 Download |
| MMMQKLRRSG EFIRFGCKSL ISSRPNKDSV SRSVSGFVNH YKSKGKLFEL SDGNYKTELH 60 HPCISRNVGM LLQQYKCFGS SAASLIQRNP LFSSLDSKDV SYFKEILGEK NVVEDKERLE 120 TANTDWMHKY KGSSKLMLLP KNTQEVSQIL EYCDSRRLAV VPQGGNTGLV GGSVPVFDEV 180 IVNVGLMNKI LSFDEVSGVL VCEAGCILEN LATFLDTKGF IMPLDLGAKG SCHIGGNVST 240 NAGGLRLIRY GSLHGTVLGL EAVTANGNVL DMLGTLRKDN TGYDLKHLFI GSEGSLGIVT 300 KVSILTQPKL SSVNLAFIAC KDYLSCQKLL VEAKRNLGEI LSAFEFLDNN SMDLVLNHLD 360 GVRNPVSSSE NFYILIETTG SDETNDREKL EAFLLKSLEK GLVSDGVIAQ DINQASSFWR 420 IREGITEALQ KAGAVYKYDL SLPVEEIYNI VNDLRGRLGD LANVMGYGHL GDGNLHLNIS 480 AAEYNDKLLG LIEPYVYEWT SKHRGSISAE HGLGVMKANE IFYSKSPETV ALMASIKKLL 540 DPKGILNPYK VLPHSLFSN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02805 | PLN02805 | 7.0e-37 | 100 | 553 | 469 | + D-lactate dehydrogenase [cytochrome] | ||
| PRK11230 | PRK11230 | 8.0e-40 | 100 | 553 | 478 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 1.0e-65 | 309 | 551 | 251 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 2.0e-76 | 138 | 550 | 430 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 1.0e-108 | 102 | 554 | 464 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005739 | mitochondrion |
| GO:0008150 | biological_process |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0009055 | electron carrier activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB16815.1 | 0 | 36 | 559 | 4 | 524 | actin interacting protein [Arabidopsis thaliana] |
| RefSeq | NP_568003.2 | 0 | 1 | 559 | 1 | 559 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002268002.1 | 0 | 78 | 559 | 69 | 551 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310828.1 | 0 | 73 | 558 | 46 | 528 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521506.1 | 0 | 62 | 558 | 71 | 564 | d-lactate dehydrognease 2, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 0 | 94 | 552 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 0 | 94 | 552 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 0 | 94 | 552 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 0 | 94 | 552 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 0 | 94 | 552 | 12 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO838775 | 330 | 140 | 468 | 0 |
| GO839525 | 343 | 129 | 465 | 0 |
| CO071363 | 284 | 122 | 404 | 0 |
| CO071824 | 285 | 122 | 405 | 0 |
| HO419275 | 401 | 157 | 555 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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