| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT4G38590.2 |
| Family | GH35 |
| Protein Properties | Length: 1053 Molecular Weight: 119544 Isoelectric Point: 7.4711 |
| Chromosome | Chromosome/Scaffold: 4 Start: 18036116 End: 18040928 |
| Description | beta-galactosidase precursor, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 65 | 350 | 0 |
| SRKHMWPSIIDKARIGGLNTIQTYVFWNVHEPEQGKYDFKGRFDLVKFIKLIHEKGLYVTLRLGPFIQAEWNHGGLPYWLREVPDVYFRTNNEPFKEHTE RYVRKILGMMKEEKLFASQGGPIILGQIENEYNAVQLAYKENGEKYIKWAANLVESMNLGIPWVMCKQNDAPGNLINACNGRHCGDTFPGPNRHDKPSLW TENWTTQFRVFGDPPTQRTVEDIAFSVARYFSKNGSHVNYYMYHGGTNFGRTSAHFVTTRYYDDAPLDEFGLEKAPKYGHLKHVHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1053 Download |
| MKSRTRYLIA ILLVISLCSK ASSHDDEKKK KGVTYDGSER NFIDHKWKKR ASFLWFCSLP 60 SKHTSRKHMW PSIIDKARIG GLNTIQTYVF WNVHEPEQGK YDFKGRFDLV KFIKLIHEKG 120 LYVTLRLGPF IQAEWNHGGL PYWLREVPDV YFRTNNEPFK EHTERYVRKI LGMMKEEKLF 180 ASQGGPIILG QIENEYNAVQ LAYKENGEKY IKWAANLVES MNLGIPWVMC KQNDAPGNLI 240 NACNGRHCGD TFPGPNRHDK PSLWTENWTT QFRVFGDPPT QRTVEDIAFS VARYFSKNGS 300 HVNYYMYHGG TNFGRTSAHF VTTRYYDDAP LDEFGLEKAP KYGHLKHVHR ALRLCKKALF 360 WGQLRAQTLG PDTEVRYYEQ PGTKVCAAFL SNNNTRDTNT IKFKGQDYVL PSRSISILPD 420 CKTVVYNTAQ IVAQHSWRDF VKSEKTSKGL KFEMFSENIP SLLDGDSLIP GELYYLTKDK 480 TDYACVKIDE DDFPDQKGLK TILRVASLGH ALIVYVNGEY AGKAHGRHEM KSFEFAKPVN 540 FKTGDNRISI LGVLTGLPDS GSYMEHRFAG PRAISIIGLK SGTRDLTENN EWGHLAGLEG 600 EKKEVYTEEG SKKVKWEKDG KRKPLTWYKT YFETPEGVNA VAIRMKAMGK GLIWVNGIGV 660 GRYWMSFLSP LGEPTQTEYH IPRSFMKGEK KKNMLVILEE EPGVKLESID FVLVNRDTIC 720 SNVGEDYPVS VKSWKREGPK IVSRSKDMRL KAVMRCPPEK QMVEVQFASF GDPTGTCGNF 780 TMGKCSASKS KEVVEKECLG RNYCSIVVAR ETFGDKGCPE IVKTLAVQVK CEKKEGKQDE 840 KKKKEDKDEE EEDDEDDDEE EEEEDKENKD TKDMENKNQD ILDSDSALVS DLGFGPFSTV 900 VVNVPLIGGA APPQPRFNLM PPSNYVAGLG RGAAGFTTRS DIGPARANGD GNADVNHKFD 960 DFEGHDAGLF ANAESDDQDK EADAIWDAID RRMDSRRKDR REAKLKQEIE NYRASNPKVS 1020 GQFVDLTRKL HTLSEDEWDS IPEIGNYSHR LY* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-14 | 69 | 196 | 136 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 6.0e-20 | 754 | 831 | 81 | + Galactose binding lectin domain. | ||
| pfam06424 | PRP1_N | 3.0e-44 | 921 | 1050 | 131 | + PRP1 splicing factor, N-terminal. This domain is specific to the N-terminal part of the prp1 splicing factor, which is involved in mRNA splicing (and possibly also poly(A)+ RNA nuclear export and cell cycle progression). This domain is specific to the N terminus of the RNA splicing factor encoded by prp1. It is involved in mRNA splicing and possibly also poly(A)and RNA nuclear export and cell cycle progression. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-135 | 67 | 352 | 300 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 65 | 831 | 799 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000398 | mRNA splicing, via spliceosome |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37515.1 | 0 | 100 | 1052 | 80 | 1036 | galactosidase like protein [Arabidopsis thaliana] |
| EMBL | CAB64750.1 | 0 | 1 | 881 | 9 | 887 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_001154292.1 | 0 | 1 | 1052 | 1 | 1052 | glycosyl hydrolase family 35 protein [Arabidopsis thaliana] |
| RefSeq | NP_195571.2 | 0 | 69 | 1052 | 1 | 988 | glycosyl hydrolase family 35 protein [Arabidopsis thaliana] |
| Swiss-Prot | Q9SCU8 | 0 | 1 | 881 | 9 | 887 | BGL14_ARATH RecName: Full=Beta-galactosidase 14; Short=Lactase 14; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-36 | 67 | 348 | 36 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4e-30 | 61 | 348 | 31 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4e-30 | 61 | 348 | 31 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
