| Basic Information | |
|---|---|
| Species | Arabidopsis thaliana |
| Cazyme ID | AT5G04960.1 |
| Family | CE8 |
| Protein Properties | Length: 565 Molecular Weight: 62170.4 Isoelectric Point: 9.112 |
| Chromosome | Chromosome/Scaffold: 5 Start: 1461907 End: 1463969 |
| Description | pectinesterase, putative, expressed |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 258 | 549 | 0 |
| IVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAG PAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKP LDNLTDIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MSSYGRLDEH EQAKLEASRK TKKRIAIIAI SSIVLVCIVV GAVVGTTARD NSKKPPTENN 60 GEPISVSVKA LCDVTLHKEK CFETLGSAPN ASRSSPEELF KYAVKVTITE LSKVLDGFSN 120 GEHMDNATSA AMGACVELIG LAVDQLNETM TSSLKNFDDL RTWLSSVGTY QETCMDALVE 180 ANKPSLTTFG ENHLKNSTEM TSNALAIITW LGKIADTVKF RRRRLLETGN AKVVVADLPM 240 MEGRRLLESG DLKKKATIVV AKDGSGKYRT IGEALAEVEE KNEKPTIIYV KKGVYLENVR 300 VEKTKWNVVM VGDGQSKTIV SAGLNFIDGT PTFETATFAV FGKGFMARDM GFINTAGPAK 360 HQAVALMVSA DLSVFYKCTM DAFQDTMYAH AQRQFYRDCV ILGTVDFIFG NAAVVFQKCE 420 ILPRRPMKGQ QNTITAQGRK DPNQNTGISI HNCTIKPLDN LTDIQTFLGR PWKDFSTTVI 480 MKSFMDKFIN PKGWLPWTGD TAPDTIFYAE YLNSGPGAST KNRVKWQGLK TSLTKKEANK 540 FTVKPFIDGN NWLPATKVPF NSDF* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 7.0e-155 | 125 | 560 | 444 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 6.0e-164 | 50 | 559 | 532 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 0 | 1 | 564 | 573 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 1 | 562 | 585 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 258 | 550 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0009505 | plant-type cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO42295.1 | 0 | 1 | 564 | 1 | 564 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_187682.1 | 0 | 2 | 562 | 3 | 559 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_196115.1 | 0 | 1 | 564 | 1 | 564 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002316458.1 | 0 | 1 | 560 | 4 | 565 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 3 | 560 | 6 | 569 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 258 | 561 | 9 | 316 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 256 | 560 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-18 | 259 | 554 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-18 | 259 | 554 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-18 | 259 | 554 | 7 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
